Fragaria vesca (woodland strawberry): 101293928
Help
Entry
101293928 CDS
T02666
Name
(RefSeq) uncharacterized LOC101293928
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03022
Basal transcription factors
fve03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101293928
09124 Replication and repair
03420 Nucleotide excision repair
101293928
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fve03021
]
101293928
03400 DNA repair and recombination proteins [BR:
fve03400
]
101293928
Transcription machinery [BR:
fve03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
101293928
DNA repair and recombination proteins [BR:
fve03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
101293928
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
Motif
Other DBs
NCBI-GeneID:
101293928
NCBI-ProteinID:
XP_011470191
LinkDB
All DBs
Position
LG1:complement(1036550..1037859)
Genome browser
AA seq
179 aa
AA seq
DB search
FVTDGDNGLSRFNKREDDFPSLREYNDYLEEVEDMTFNLIEGIDVPAIEAKIAQYQEENA
EQIMINRARKAEELAAALAASKGQPVQNDTDFALNQGSQAGFGTSMQGQYAPTISGQPRP
LGMGGPQPLPLGGMHDMHGYDDEEMMQLRAERGPRAGGWSPKISRKRALEEAFSSIWVS
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
tttgtcactgatggagacaatggattgtctagattcaataaacgagaagacgattttcct
tccttgagagaatacaatgattacttggaggaagtagaggatatgacgtttaacttgatc
gaaggaatagatgtccctgctatcgaagccaaaattgcacagtaccaggaagaaaatgct
gaacaaataatgattaatagagcccgcaaggctgaagaactagccgcagctctagcagca
agcaagggtcaacctgtacaaaatgatactgatttcgcactgaaccaaggctctcaagca
ggatttggtactagcatgcaggggcaatatgcacctacaatttcgggtcaacctcgacct
ttgggcatgggcggcccccaaccactgccactcggagggatgcatgatatgcatggatat
gatgatgaagaaatgatgcagctgcgagcagagagaggtccgagggcaggaggatggagt
ccaaagataagcaggaagagggcccttgaagaagccttcagtagcatttgggtttcatag
DBGET
integrated database retrieval system