KEGG   Fragaria vesca (woodland strawberry): 101293928
Entry
101293928         CDS       T02666                                 
Name
(RefSeq) uncharacterized LOC101293928
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03022  Basal transcription factors
fve03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    101293928
  09124 Replication and repair
   03420 Nucleotide excision repair
    101293928
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:fve03021]
    101293928
   03400 DNA repair and recombination proteins [BR:fve03400]
    101293928
Transcription machinery [BR:fve03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     101293928
DNA repair and recombination proteins [BR:fve03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     101293928
SSDB
Motif
Pfam: MAT1
Other DBs
NCBI-GeneID: 101293928
NCBI-ProteinID: XP_011470191
LinkDB
Position
LG1:complement(1036550..1037859)
AA seq 179 aa
FVTDGDNGLSRFNKREDDFPSLREYNDYLEEVEDMTFNLIEGIDVPAIEAKIAQYQEENA
EQIMINRARKAEELAAALAASKGQPVQNDTDFALNQGSQAGFGTSMQGQYAPTISGQPRP
LGMGGPQPLPLGGMHDMHGYDDEEMMQLRAERGPRAGGWSPKISRKRALEEAFSSIWVS
NT seq 540 nt   +upstreamnt  +downstreamnt
tttgtcactgatggagacaatggattgtctagattcaataaacgagaagacgattttcct
tccttgagagaatacaatgattacttggaggaagtagaggatatgacgtttaacttgatc
gaaggaatagatgtccctgctatcgaagccaaaattgcacagtaccaggaagaaaatgct
gaacaaataatgattaatagagcccgcaaggctgaagaactagccgcagctctagcagca
agcaagggtcaacctgtacaaaatgatactgatttcgcactgaaccaaggctctcaagca
ggatttggtactagcatgcaggggcaatatgcacctacaatttcgggtcaacctcgacct
ttgggcatgggcggcccccaaccactgccactcggagggatgcatgatatgcatggatat
gatgatgaagaaatgatgcagctgcgagcagagagaggtccgagggcaggaggatggagt
ccaaagataagcaggaagagggcccttgaagaagccttcagtagcatttgggtttcatag

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