Fragaria vesca (woodland strawberry): 101293962
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Entry
101293962 CDS
T02666
Name
(RefSeq) cell differentiation protein RCD1 homolog
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101293962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101293962
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101293962
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
DUF2249
Motif
Other DBs
NCBI-GeneID:
101293962
NCBI-ProteinID:
XP_004294416
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Position
LG3:15125976..15130568
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AA seq
311 aa
AA seq
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MYAPFGGPIGSKPTAAAAGAQPDPEMASAEQLVLELSNPELRENALLELSKKRELFQDLA
PLLWNSFGTVAALLQEIVSIYPVLSPPNLTPAQSNRVCNALALLQCVASHPDTRMYFLNA
HIPLYLYPFLNTTSKSRPFEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEM
GSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLGNMVASLAEQHSSRLLKHII
RCYLRLSENPRACDALRSCLPDMLRDATFSVCLREDQTTRRWLQQLLHNVGVSRVPGLQA
GAGFDHMMINQ
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgtacgcgccgtttggaggtccgatcggttctaaacctaccgccgccgccgccggagcc
caacccgaccctgaaatggcctcagccgagcagttggttctcgagctcagcaaccctgag
cttcgcgaaaatgctctcctcgaactctccaagaagagagaactgtttcaagatttggct
ccattgttatggaattctttcggcactgttgctgctctgttgcaggaaatagtttcaata
tacccggttctatccccaccaaatctaactcctgcccaatcaaatcgtgtttgcaatgcg
cttgctcttcttcagtgtgttgcgtcacacccagacacgaggatgtatttccttaatgct
cacatacctttatatttgtacccttttcttaatacaacaagcaagtcaaggccgtttgag
tacttgaggctcaccagtttaggtgtcattggtgccttggtgaaggttgatgacacagaa
gtgatcagcttccttctctcaacagaaataattcccctgtgcctgcgcactatggaaatg
ggcagtgagttgtcaaaaacagtcgccacgtttattgttcaaaagattttgttggatgat
gtgggcttggattatatttgcactacagcagagcggttttttgcagtaggtcgagtgttg
gggaacatggttgcatcacttgctgaacaacattcatcgcgtttattgaaacatattatc
cgctgttaccttcgattatccgaaaacccaagagcatgtgatgctttaagaagttgtctt
cctgacatgttaagagatgctaccttcagtgtttgccttcgtgaagatcaaactacaagg
agatggcttcagcagttgcttcacaatgttggagttagtcgggttcctgggcttcaggct
ggggcagggtttgatcatatgatgataaatcaatag
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