Fragaria vesca (woodland strawberry): 101293975
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Entry
101293975 CDS
T02666
Name
(RefSeq) serine/threonine-protein phosphatase PP1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101293975
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
fve01009
]
101293975
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fve03021
]
101293975
03019 Messenger RNA biogenesis [BR:
fve03019
]
101293975
03041 Spliceosome [BR:
fve03041
]
101293975
Enzymes [BR:
fve01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
101293975
Protein phosphatases and associated proteins [BR:
fve01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
101293975
Transcription machinery [BR:
fve03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101293975
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
101293975
Spliceosome [BR:
fve03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101293975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
101293975
NCBI-ProteinID:
XP_004298839
LinkDB
All DBs
Position
LG5:complement(1890717..1893918)
Genome browser
AA seq
320 aa
AA seq
DB search
MGDAIVDDLIRRLVSAKSGRTTKQVQMTEAEIRHLCTTSKEIFLSQPNLLELEAPIKICG
DVHGQFSDLLRLFEYGGYPPEANYLFLGDYVDRGKQSIETICLLLAYKIKYKENFFLLRG
NHECASINRIYGFYDECKRRFNVRIWKVFTECFNCLPVAALVDEKILCMHGGLSPDLKNL
DQIRNIARPVDVPDQGLLCDLLWADPDKDVDGWGENDRGVSFTFGADTVAEFLQKHDLDL
VCRAHQVVEDGYEFFGKRKLVTIFSAPNYCGEFDNAGAMMSVDDTLTCSFQILKASEKKG
KFGVGSNMLRPGTPPHKGKG
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgggagacgcgattgtggacgatctcatacggcggctggtgtcggcgaagagcggccgg
acgacgaagcaggtgcagatgacggaggcggagatacggcacctctgcaccacctccaag
gagatctttctcagtcagcccaaccttctcgaactcgaagctcccatcaagatttgcgga
gatgttcatggtcagttttctgatcttttacggttgtttgagtatggtgggtacccacct
gaggccaactatttattcctgggggactatgttgatcgtgggaagcaaagcatagagaca
atatgccttctccttgcgtataagattaaatacaaggaaaacttcttcctcctaagaggc
aaccatgaatgtgcttccatcaaccgtatatacgggttctatgatgagtgcaagagaaga
tttaatgttcgtatttggaaggtttttactgagtgcttcaactgtctgcctgtggctgct
cttgttgatgagaagatcctctgcatgcatggtggtctatctcctgatttgaaaaatcta
gatcagattagaaatattgcccgcccagtggatgtaccagatcagggacttctctgtgat
cttttgtgggctgatcctgataaagatgttgatggttggggagagaatgatcgtggtgtg
tcatttacatttggggctgacacggttgctgaatttctccagaaacatgatcttgatctt
gtctgccgtgctcaccaggttgtggaagatggatatgagtttttcggaaagaggaagctg
gtgactatattttcagcgccaaattactgtggcgaatttgataatgctggtgccatgatg
agtgtggatgatacattgacatgttccttccagatcttgaaagcatctgagaagaaagga
aagtttggtgtaggcagcaacatgttaagaccaggaactccacctcataagggcaagggc
tga
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