KEGG   Fragaria vesca (woodland strawberry): 101294078
Entry
101294078         CDS       T02666                                 
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03013  Nucleocytoplasmic transport
fve03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    101294078
   03015 mRNA surveillance pathway
    101294078
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fve03019]
    101294078
   03041 Spliceosome [BR:fve03041]
    101294078
Messenger RNA biogenesis [BR:fve03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     101294078
Spliceosome [BR:fve03041]
 Complex C
  Other components
   EJC/TREX
    101294078
SSDB
Motif
Pfam: Pinin_SDK_memA
Other DBs
NCBI-GeneID: 101294078
NCBI-ProteinID: XP_004299965
LinkDB
Position
LG5:complement(16752100..16755536)
AA seq 423 aa
MASAAVEKTEEVLRKEIDELQRQQREITERLRDPRGLRKGGGGGGSAAAAPRNFAANGAR
PRGFTRPADRADVEDQPPAKRRLSSAVVKVEDGEIVESAEGAKDAKKKDSSEAVKADRSD
RRLSNLQQGSWLRRDGNHGAAKKDFDIPATEHVPRVLPKQEDPSVVNRNKRMLGHVLGTL
EKFRKEDMQLSGTEAFMRRSNSLQRAEQRAREESERLRIQEREHIAEKRRRDLTLRARVA
AKTEEKKLELLFLQWSDHHKKLSNFIRTKAEPPIYYLPKKPSDEDATLAEQQKEKEFLEW
KAARREELSDYQKQIEEQYLANVEKELERWQNARKARKANNDTMNLQETMDKELDTHRLE
HGPKKRKIPDGSNNEDEDDVEDINVVEDDMMDDVLDVDDNSRMVDETAKSDAVNASPNAD
NID
NT seq 1272 nt   +upstreamnt  +downstreamnt
atggcaagcgccgcagttgagaaaacagaggaggtgctccgcaaggagatcgatgagctc
caacgccaacagcgcgagattacggaacgcctacgagaccctaggggacttcgcaaggga
ggaggtggaggaggctcggccgctgccgctccccgcaacttcgccgccaatggcgctcgc
ccgcgaggcttcactcgacctgcagatagggctgatgtggaggatcaacctcctgcgaaa
cgccggctttcgtcagctgttgtcaaggtggaggatggagagatagttgagagtgctgaa
ggagccaaggatgcgaagaagaaggattcaagcgaggcggtgaaagctgatcgcagtgat
aggaggttgtcaaatttgcaacaaggtagctggttaaggagggatggcaatcatggtgca
gccaagaaggactttgacattccggcaacggagcatgttccgagggtattgccaaagcaa
gaagaccccagcgtggttaacaggaacaaaagaatgctcgggcatgttttgggcacttta
gagaaattcaggaaagaagatatgcaactctcaggaacagaggctttcatgcggagatca
aactctttacaaagagctgagcaaagagcacgtgaagaaagtgaaagacttcggatacaa
gagcgagaacatattgcggaaaagcggagaagagatctgactctgcgagcacgtgttgct
gccaagactgaagaaaagaaattggaactgctttttcttcagtggagtgatcatcataag
aaacttagcaatttcataaggaccaaggcagagcctccaatatattatctacccaagaaa
ccatcagatgaggatgctaccttggctgagcagcaaaaagaaaaggagttcctagaatgg
aaagcagcacgaagggaggaactgagtgattatcagaagcagattgaggagcagtatcta
gcaaatgttgagaaggagttggagaggtggcaaaatgcaaggaaagcaaggaaagccaat
aatgatacgatgaacttacaggaaacaatggacaaagagttggacacacataggcttgag
catggtcccaagaaaagaaagatcccagatggaagcaacaatgaagatgaggatgatgta
gaagatatcaacgtagtggaggatgacatgatggatgatgtgttggatgttgatgataac
agtagaatggttgatgaaacagctaaatcagatgcagttaatgccagtccaaatgcggat
aatattgattag

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