Fragaria vesca (woodland strawberry): 101294130
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Entry
101294130 CDS
T02666
Name
(RefSeq) nuclear pore complex protein NUP98B-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101294130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101294130
03036 Chromosome and associated proteins [BR:
fve03036
]
101294130
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101294130
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
101294130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
101294130
NCBI-ProteinID:
XP_004309505
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Position
Un
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AA seq
557 aa
AA seq
DB search
MSSFGFGFGQTPNSFNPPKPFSETKTAFGWSPFGNTTPPCGTTTIPALATNNATSGTASS
PAFDFSPVFGAPVFNSASAPASGTNCTITLATTGSPVFGTSTPTIGTTVTITPGVGTSSA
PTGGTNAIAITINVGTASTSSVGNGITIAPSVGSTVTIAPASGTSITLMQAAGTTITITS
NPTSGVTSTPGIGAASTPTVCFPTSTAPASTRGGFGFPTSTAPASTRGGFGFPTSTAPAS
TQGGFGFPTFTSPTSTQGGFGFPASTAPASTQGGFGFPTYTTPASTSTFSSSKVGASSQF
GTQSSPFGAQPTPIVGNNASRQSASGSHQGHGSRVVPYTASIDADSFSAASPIKIHSISA
MPIHKHKCHEELRWEDYQLGDKGGAIPPGGSSKHTTQSFVQKEKRASFCPFGCPFAQTSS
STFNTSTSSPCAERSTSLFAQPSSNPFGPRPSPSPFGAQPSSSTFGAKPSSSTFGPPPSS
SSFGAQPSSSIFGLPPSSSPFGAIFGNSTFAPSSFGQTSSPNPSWFMPSQVSEPVETSTS
PFHSNLTNTAGSSPSFY
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctttcggatttgggttcggtcaaacccctaactcttttaatcctccaaagccg
ttttctgaaaccaaaacagcctttggatggagtccttttggaaacacaaccccgccttgt
ggcactaccacaatcccggctttagccactaacaacgctacttctggcactgctagtagc
ccagcgtttgacttttcccctgtttttggtgccccggttttcaacagtgctagtgctcca
gcttctggcactaattgtaccatcactttggccacaacaggttccccggtttttggcact
agtaccccaactattggcactactgtcaccataacccctggtgtaggcacttctagtgct
ccaactggtggcactaacgccatcgccataaccataaatgttggcactgctagtacttca
tctgttggcaatggtatcaccatagccccctctgttggctctactgtcaccatagcccca
gcttcgggaactagtatcaccctaatgcaagctgcgggaactactatcaccataaccagc
aacccaacttctggtgtaacgagcaccccaggcattggtgctgcaagtactccaaccgtt
tgctttccaacatccactgctcctgcaagcacccgaggcggttttggctttccaacatcc
actgctcctgcaagcacccgaggcggttttggctttccaacatccactgctcctgcaagc
actcaaggtggttttggctttccaacattcacaagtcctacaagcacccaaggcggtttt
ggcttcccagcatccactgctcctgcaagcacccaaggcggttttggctttccaacatac
acaactcctgcttcaacttccaccttttccagcagtaaagttggtgcttcatctcagttt
ggaacgcagagttctccatttggagctcagccaacaccaatagttgggaacaatgcctcc
aggcagtcagcttctgggagccaccaggggcatggaagtagagtggttccttacacagca
tctattgatgcagatagttttagtgctgcctctcctatcaaaatacattcaatatcagca
atgccaattcataagcataaatgtcatgaggaactcagatgggaagattatcaattgggg
gataaaggtggagcgattcctcccggtgggagctctaaacataccacacagtcatttgtt
cagaaagaaaaacgtgcttccttttgtccgtttggatgtccatttgctcaaacatcttca
agtacttttaatacctcaacttcatctccatgtgctgaaagatctacaagtttatttgct
caaccatcatcaaatccatttggtccgcgaccatctccaagtccatttggtgcccagcca
tcttcaagtacatttggtgccaaaccatcttcgagtacatttggccctccaccatcttca
agttcatttggtgcccaaccatcttcaagtatatttggtcttccaccatcttcaagtcca
tttggtgcaatttttgggaattctacttttgcaccttcatcatttgggcaaacttcatct
ccaaatccctcttggtttatgccttcacaagtgtctgagccggtcgaaactagtacttcc
cccttccacagcaatctaacaaatacagcaggttcctcgcctagcttttactag
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