Fragaria vesca (woodland strawberry): 101294151
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Entry
101294151 CDS
T02666
Name
(RefSeq) E3 ubiquitin-protein ligase RING1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fve04131
]
101294151
04121 Ubiquitin system [BR:
fve04121
]
101294151
Enzymes [BR:
fve01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101294151
Membrane trafficking [BR:
fve04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
101294151
Ubiquitin system [BR:
fve04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101294151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING_16
zf-RING-like
Rad50_zn_hook
Zn_ribbon_FGT1_2
CxC4
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
101294151
NCBI-ProteinID:
XP_004294651
LinkDB
All DBs
Position
LG3:complement(18975341..18976702)
Genome browser
AA seq
356 aa
AA seq
DB search
MAMSSPSPTTSYWCHRCTRFVRILLQDASVTCPYCDTGFLEEIDTTPPPAPTHLHRRFPP
SYTHDQNPPPTSRRVRRSSGDRSPFNPVIVLRGAADDSESSSFELYYDDAAGSGLRPLPP
TMSEFLMGSGFDRLLEQLAQIEITGLGRPENPPASKSAVESMPVVKIDESHVGSESHCAV
CKEAFEFGSEAREMPCSHIYHSDCILPWLSMRNSCPVCRHELPVDRNSEPGHDEEATGLT
IWRLPGGGFAVGRFSGARRPGERELPVVYTEMDGGFNGSGAPRRVLWASRNRGRESRGIG
RAFRNFASFFGRFRSNSSSRTGSETGSEAFSRSRSHSNSVFGRYVQRRSRAWVLDD
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggccatgtcttcgccgtctccgacgacgtcgtattggtgccaccgctgcacccgcttc
gtccgcatcctcctccaagacgcctccgtcacctgcccttactgcgacaccggcttcctc
gaagagatagacaccaccccgccgccggccccgactcacctccaccgccgcttcccgcct
tcctatactcacgatcagaacccgcccccgacgtcgcggcgggtccgccggagctccggc
gaccggtcgcctttcaatccggtcatcgtcctacgtggcgcggccgacgactccgagtcg
agctcgttcgagctttactacgacgacgccgccgggtcggggctccggccgctgccgccg
accatgtcggagtttctgatggggtcggggtttgatcggctgctggagcagctggcgcag
attgagataaccgggttgggccgacccgagaacccgccggcttctaaatcagccgtggag
tcgatgccggtggttaaaatcgacgagtctcacgtcgggtcggagtcgcactgcgcggtg
tgtaaagaagctttcgaattcgggtcggaggcccgagaaatgccttgcagccacatatac
cattccgactgcatcctgccgtggctctcgatgcgaaactcgtgcccggtctgccgccac
gagctgcccgttgaccggaactcggagccgggtcacgacgaggaggcaaccgggttaacc
atctggagattacccggaggcgggttcgccgtgggtcggttctcgggcgcgagaagaccc
ggggagcgtgaattgccggttgtgtacacggaaatggacggagggttcaacggaagcggg
gcgccgagaagggtattatgggcatcgagaaatagaggaagagagagccgcgggattggg
agggcttttcgtaatttcgcgtcgttctttgggaggtttaggtcaaattcgtcttcgagg
accgggtcagaaaccgggtcggaggcatttagtcggagtcggagccactcaaactcggtg
ttcgggcggtacgtgcagcggcgcagccgggcttgggtgttggatgattag
DBGET
integrated database retrieval system
