Fragaria vesca (woodland strawberry): 101294339
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Entry
101294339 CDS
T02666
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
101294339
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
fve04040
]
101294339
Ion channels [BR:
fve04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
101294339
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GFIT
Motif
Pfam:
RVT_3
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
101294339
NCBI-ProteinID:
XP_011460112
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Position
LG3:1810187..1813941
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AA seq
838 aa
AA seq
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MDIEEFSDSSVTTPDYISHGSAEQKPISVTPMRKAWLKVTLIWDIYSAGTTILLKIVFSR
VIHYIHEILSWKCILVVSCIAVSLDPLFLYIPIIDENKCLGINRTLKIVTLVLRSLIDIT
FMTHIIGLVSDWKFSDEPQRHVSYFDSHFEPASGLLWKLKFLKQAIAKRMPWLSGTVMIH
FLAILPIPQVAILFVFPRIGSEFFLKTEIITLFLVFQYFPRVCQIYISSKKVNMTRTWVI
GGFSLFLYILASHVIAALWYFFAIHREISCWHQACDKSAGCLATYACGGSSTSMNITFQN
ERCPIFPPNTTLFDFGIFLDILQSGNAGSVNFLTKFLYSLWWGLKNLSSFGTNLETSSYW
WENCFAILICVVGLVLFLYLVGNVQTYMQFATTKSANFDDSRRTRIKAKYRDINKWMSKH
GLPADMRTAIRKDIKEWNIAGRYIDHDVDVRFVNNICGGGIVLVLSEFFRLNALKRVPML
QNVPEFGLILISQYLYLETYDENAVVARAGKPIDSMFFIIDGVIDWTDETNKATDAETTG
SSSSSKSSKLQNGDYFGEELLSWAADNYGSSYFSPVPTSTGDAKCRTKVEVLQLSRGTLV
NTEVRDYISESDSSLAHLEELMAVHLHNHIDQIMDEYPLSKVKWKCPYRGWLKVNCSAVW
ERESRVAGMAWVCRNDEGAFVAAGSLCGIRCMDRFFAEALSIAKAIEFCTTIIDEVSGDN
FGRIVVESDNQDLMDCLLQLHEQDLVVPKTYLNNSSLEPNNRIGENLRPILGDIYSRLAP
GFKAITYVHCDSECNAAAHCIASHAMDDATDSSSWYGLDAAPSWLIPALTKDSPHLYT
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atggatatcgaggagttctcagactcaagcgttacaacaccagattacatttcacatggt
agtgcagaacaaaagccaatttctgtaactccaatgaggaaagcatggttaaaagttact
cttatttgggatatatattctgctggaacaactatattgttgaagatagtattttcaaga
gtaatccactatatacatgaaattctaagttggaaatgtatacttgtggtatcctgcatt
gcagtctcattggatcctttgttcctgtacattccgatcatcgacgaaaacaagtgcctc
ggaatcaacagaacgttgaagatagtcacgctagttctccgatcacttatagatatcact
ttcatgactcacattataggtctagtttctgactggaaattttccgacgagccccaaagg
cacgtctcctacttcgactctcactttgagccagcatcaggcttgctttggaaactaaag
tttcttaaacaagccatagctaagaggatgccatggttatctggtactgtcatgatccac
tttcttgctattcttcctatcccacaggtggcaatattatttgtctttcctcgaatcggc
tctgaattttttctcaaaactgagatcatcaccttgtttcttgtcttccaatatttcccg
agggtttgccaaatctacatatcaagtaagaaagttaacatgaccagaacatgggtcata
ggtggatttagtttgtttttgtacatccttgcaagtcatgtgattgcagccctctggtat
ttttttgcaattcatagagagatctcatgttggcaccaggcttgtgataaaagtgcaggc
tgcctagcaacttatgcttgtggtggcagcagtacttcaatgaatatcacattccaaaat
gagcgatgcccaatatttccaccaaatactacattatttgattttggaatatttcttgat
attcttcagtctggtaatgcaggatcagtaaacttcttgacaaaattcttatactctcta
tggtggggactgaaaaatctaagtagttttggcacaaatcttgaaacaagtagctactgg
tgggaaaactgttttgcaattcttatctgtgttgttggcttggtactatttttgtacctc
gttggaaatgtacagacatatatgcagtttgcaactacaaaatcagcaaactttgatgat
tcaagacggactaggatcaaagcgaagtatcgagatataaacaagtggatgtcaaagcat
ggtcttcctgctgatatgaggacagcaatcaggaaagacataaaagaatggaacatagca
gggagatacatagatcacgatgtggatgttcgattcgtcaacaacatttgcggaggaggc
atcgtattagtcctgtcggaatttttccggctaaatgctctaaagagagtacccatgctt
caaaatgtgccagagttcgggttgatacttatcagccaatatctatacctagaaacctat
gatgagaatgcagttgttgctcgagcaggaaaaccgatagattcgatgttcttcattata
gatggagtgattgattggaccgacgagactaacaaggctaccgatgctgaaaccaccggt
tcttcctcctcatcaaagagcagcaagcttcagaacggtgattattttggagaagagctt
ttgagttgggcagcagataactatgggagctcttattttagcccggttcctacttcgact
ggagatgccaaatgtcgaacaaaagtagaagtcctgcagctgagtagggggacgttagta
aacacagaagtaagggactacatatctgagagtgattcttctctggcgcacttggaggag
ctaatggcagttcatctccataaccacattgatcagataatggacgagtatcctctttct
aaggtgaaatggaaatgtccttaccgtggatggctgaaagtgaactgtagtgctgtgtgg
gaacgtgaatcgagagtggcaggcatggcttgggtttgtaggaatgatgaaggagctttt
gtagccgccggaagtctatgtgggataagatgcatggacaggtttttcgccgaagctctc
agcattgctaaggctatcgaattttgtaccactattattgatgaagtttctggtgacaac
ttcggccgcatagttgtggagtctgataaccaggatctcatggactgcctgcttcagctg
catgaacaggacctagttgtaccgaaaacatacttgaataactctagcctggaaccaaat
aaccgtattggtgaaaaccttcgaccaatcctaggggatatttacagccgcttggctcca
gggtttaaggctattacttatgtgcattgtgacagtgagtgcaatgcagctgctcattgc
atagcatctcatgccatggatgatgctactgattcttcgtcttggtatggtcttgatgca
gcccctagttggctaattcctgccctcacgaaggatagcccgcatttgtacacatga
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