Fragaria vesca (woodland strawberry): 101294552
Help
Entry
101294552 CDS
T02666
Name
(RefSeq) alanine--tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101294552
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fve01007
]
101294552
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fve03016
]
101294552
Enzymes [BR:
fve01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
101294552
Amino acid related enzymes [BR:
fve01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
101294552
Transfer RNA biogenesis [BR:
fve03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
101294552
Prokaryotic type
101294552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
tRNA_SAD
DHHA1
Motif
Other DBs
NCBI-GeneID:
101294552
NCBI-ProteinID:
XP_004297751
LinkDB
All DBs
Position
LG4:complement(22652137..22659220)
Genome browser
AA seq
1002 aa
AA seq
DB search
MCGFLKQGVIAFNSLLLLRRNPFSLPPPSHLTRNRSLSAIATTSFHPKMPGLESQAVGVE
WPANRVRDTFFSYFMEKEHKNYKSSPVVPHNDPTLLFANAGMNQFKPIFLGTADPNTDLS
KLTRACNTQKCIRAGGKHNDLEDVGKDTYHHTFFEMLGNWSFGDYFKSEAIEWAWVLLTQ
VYKLPEDRFYATYFGGDEKLGLAPDNEARDLWLKFLPPGRVLPFGCKDNFWEMGDTGPCG
PCTEIHYDRVGNRDAASLVNNDDPTCLEIWNLVFIQFNRESDGSLKPLPAKHVDTGMGFE
RLTSVLQNKMSNYDTDVFMPIFDAIQQTTGARPYSGKVGEDDVDKVDMAYRVVADHIRTL
SFAIADGSRPGNDGREYVLRRILRRAVRYGREVLKAQEGFFNGLVPVLVTLMGDVFPELK
GNKERIRDIIKEEEEAFGKTLLKGIEKFKKAAQDVQGKKFSGQEAFVLWDTFGFPLDLTQ
LMAEENGLEVDVEGFNFAMDEARERSRNAQNKEEGGAIVLNADATASLHKCGVAATDDSF
KYIWFQDHESVIKAIYTGSEFMDSVAAGSLVGVILESTSFYAEQGGQIFDTGSLQGGFGS
FQVRNVQIFGGFVVHIGSFSGEHGKLSVGEKVVCKVDYKRRTLIAPNHTCTHMLNFALKE
VLGPDVDQKGSIVLPEKLRFDFSHGKPVEPEQLRRIESIVNEQIKAELDVSVKEVALDDA
RGIKGLRAVFGEVYPDPVRVVAVGRKVEDLLADPKNEEWLSISTEFCGGTHLTNTREAEA
FALLSEEGTAKGIRRITAVTTNAAFDAIKLADSLEQEVTEASKAEESLLEKKIASFKSRI
DAAQIPAAKKADIRDKIVQLQNKVRKAQKKIAEQNLQKAVKVAREMAELAASDGKAFCVS
HVDVGLDIAAVREAVCKVIEKGMPAIVFSTDETTNKAVACAGVPGDKGKQLEVSQWLIAA
LGPLKGRCGKGKGGLATGQGTDASRLKESIDVATTFAQMKLS
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggattccttaagcaaggagtgatagcgttcaactctctccttctcctcagacgt
aaccctttctctctgccgccgccgtcacacctcactcgcaaccgctccctctccgccatc
gcaacgacgtcgtttcatcccaagatgccaggactcgaatctcaggcagtcggagtcgag
tggccggcgaaccgcgtgcgtgacactttcttcagctacttcatggagaaggagcacaag
aactataagtccagccccgtcgtccctcacaacgatccaactcttctctttgcaaacgct
ggaatgaaccagtttaagcccatttttctgggaacggcggacccgaacaccgatttaagc
aagctgacgagagcatgcaacacacagaaatgtattagggcaggtgggaagcataatgat
ctcgaagacgtggggaaagacacctaccatcacacttttttcgagatgctggggaattgg
tcgttcggggactatttcaagagtgaggccattgaatgggcttgggtgcttctcactcag
gtttataagctgccagaggatcgattttatgccacttatttcggtggtgatgagaagctg
ggtcttgctcctgataatgaagctagagatttatggcttaagtttctaccacctggacgt
gtactgccttttggctgtaaggataacttttgggagatgggcgatactggtccttgcggc
ccttgcactgagatccattatgatagagttggtaatcgggatgctgcatcattagtcaac
aatgatgaccctacctgccttgagatctggaaccttgtctttattcagttcaatagggaa
agtgatggctctctcaaaccattgcctgctaagcatgttgacactgggatgggatttgaa
agattgacatctgtacttcagaacaagatgagcaattatgacactgatgtgttcatgcct
atatttgatgctattcagcagactacgggggctcgcccatattctgggaaagttggagag
gatgatgtagacaaagttgacatggcatacagggttgttgcagaccatataagaactctt
tcatttgccattgctgatgggtcccgtccaggcaatgacggacgtgaatatgttctgaga
cgtatccttcgtcgagctgttcgatatggaagagaagtcctaaaagcacaagaaggattt
ttcaatgggcttgtacctgtgttggtaacactgatgggtgatgtattcccggaactaaaa
ggaaataaagaacgcattagagacataatcaaagaggaagaggaagcatttggcaagact
ctacttaagggaatagaaaaattcaaaaaggctgctcaagatgttcaaggcaaaaaattt
agcgggcaggaagctttcgtcttgtgggacaccttcgggttccctttggatttgactcag
ttgatggcagaggaaaatggattagaagttgatgttgagggtttcaatttcgctatggat
gaggctcgagaaagatcaaggaatgcccaaaataaggaagaaggtggtgccattgttttg
aatgctgatgctactgcttcattgcacaagtgtggagttgctgcaacagacgacagcttc
aaatatatatggtttcaggaccatgaaagcgtgattaaagcaatttacactggttcagag
ttcatggatagtgttgctgctggcagtttagttggtgttattttggagtctacgagtttc
tatgctgagcaaggtggacagatttttgacactggatcactacaaggaggctttggctca
tttcaagtccgcaatgttcaaatttttggaggttttgttgtccacattggctccttttct
ggagagcatggcaaactctctgtgggtgaaaaagtggtctgtaaggttgactataaaagg
cgtacactcattgcgcctaaccatacctgcacacatatgttgaactttgctctgaaggaa
gttcttggccctgatgttgaccagaagggttccattgttcttcctgaaaaattgagattt
gatttttctcatggtaagccggtggaacctgaacagttgagaagaatcgaatcaatcgtg
aatgagcaaataaaagctgagttagatgtgtctgttaaggaggtagccctggatgatgct
cggggcatcaaaggtttaagggctgtatttggagaggtctatcctgacccagtgagagtt
gtggctgttgggcgaaaggttgaggaccttctggctgaccctaaaaacgaggaatggttg
tcaatatcgacagaattttgtggaggaacccatttaacaaatacacgtgaagctgaggca
tttgcccttttatcggaagagggaactgctaagggaatccgaaggataactgctgtcaca
accaatgctgcttttgatgcaattaaattggcagattcacttgagcaggaagtaactgaa
gcttccaaggctgaagagagcttgctggagaagaagatagcttcctttaaatctcgcata
gacgcagcacaaattccagcggctaagaaagctgatataagggacaagattgttcaactt
cagaataaagtgagaaaggcacagaagaagattgcagaacaaaatttacaaaaagctgtc
aaggttgcaagggagatggcggaacttgctgcatctgatgggaaggctttctgtgtatcc
catgttgatgttggtttagatatcgctgcagtccgcgaagcagtgtgtaaagtcatagag
aagggaatgcctgcgatagtttttagcactgatgaaactacaaataaggccgtggcatgt
gctggagtaccaggagacaaaggcaagcaattggaggtgtcacagtggttgattgcagct
ttgggtcccctgaaaggaaggtgtggtaaaggaaaaggtggccttgctactggccaggga
acagatgcatctcgtctgaaggagtcaatagacgtggcaaccacttttgcgcagatgaaa
ttgagttga
DBGET
integrated database retrieval system
