KEGG   Fragaria vesca (woodland strawberry): 101294677
Entry
101294677         CDS       T02666                                 
Name
(RefSeq) probable cytosolic iron-sulfur protein assembly protein CIAO1 homolog
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
fve  Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:fve00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:fve03036]
    101294677
   03400 DNA repair and recombination proteins [BR:fve03400]
    101294677
Chromosome and associated proteins [BR:fve03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    101294677
DNA repair and recombination proteins [BR:fve03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     101294677
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_DCAF12 Beta-prop_HPS5 PROPPIN Beta-prop_ELP1_1st
Other DBs
NCBI-GeneID: 101294677
NCBI-ProteinID: XP_004302992
LinkDB
Position
LG6:12559370..12563664
AA seq 346 aa
METLKQIQKLEGHTDRVWSLAWNPLSGLNGHPLKLASCSGDKTVRIWERKPSNSWECQAV
LDDPHSRTVRSCSWSPSGKILATASFDGTTAIFQDVGDDYECVSTLEGHENEVKSVSWNA
SGSLLATCGRDKTVWIWEVLPGNEFECVAVLQGHTQDVKMVQWHPSVELLFSCSYDNTVK
IWADDGEDDNWVCVQTLAQSNSGHSSTVWALSFNATGDKMVTCSDDLTLKIWGTDNGKML
SSDGFAPWSHLCTIAGYHDRTIFSVHWSRDNIIASGAADDAIRFFVENNESDSLVNGPSY
NLLLKKEKAHDMDINSVQWCPGENRLLASAADDGTIKIWELTSVSC
NT seq 1041 nt   +upstreamnt  +downstreamnt
atggagactctcaagcagattcagaagctcgagggccacaccgaccgggtctggagcctc
gcgtggaacccactctccggtctcaacggccaccccctaaaactcgcctcatgcagcggc
gataaaaccgtccgtatctgggaacgcaaaccctccaactcctgggaatgccaggcagtt
ctggatgatccgcacagcaggaccgtccgatcgtgctcttggtccccctccggtaaaatc
ctagccaccgccagcttcgacggcaccaccgcgattttccaggacgttggggacgattac
gagtgcgtctccactttagagggtcacgagaatgaagtgaagagtgtgtcttggaatgcg
tccgggtctctgcttgcgacttgcgggagggacaagactgtgtggatatgggaggtgttg
ccggggaatgagtttgagtgcgttgcggtgttgcaaggccatacgcaagatgtgaagatg
gttcagtggcatccctctgtggagcttttgttttcgtgtagctatgacaacactgtcaag
atatgggcagatgatggtgaggatgataactgggtgtgtgtgcaaacgttagctcaatct
aacagtggtcactcttctactgtatgggctctatcatttaatgctacgggagacaaaatg
gttacctgcagtgatgatcttaccctaaagatatggggaacagacaacgggaagatgcta
tcttcggatggctttgcaccttggagtcatctttgcactattgcgggttatcatgacagg
actatattttcagttcattggtcaagggacaatatcattgccagtggagctgctgatgat
gccataagattttttgtggagaataatgagagcgatagtttggtcaatggaccttcctat
aacttgcttctcaagaaggagaaagcccacgacatggatataaattcagtgcagtggtgc
cctggggagaataggcttcttgcttctgcagctgatgacgggacgatcaaaatatgggag
ctgacatctgttagctgctga

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