Fragaria vesca (woodland strawberry): 101294706
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Entry
101294706 CDS
T02666
Name
(RefSeq) nuclear poly(A) polymerase 1-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101294706
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101294706
Enzymes [BR:
fve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
101294706
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
101294706
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
101294706
NCBI-ProteinID:
XP_011466871
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All DBs
Position
LG1:16015676..16018296
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AA seq
654 aa
AA seq
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MGPISLSGPTEFDVMKSRELERYLRNDAGIYECREESVMREEVLGRLDEIVKQWVKAVCQ
AKGLGKEFVEEANAKIFTFGSYRLGVHSPGADIDTLCVGPAYVTREEGFFGELYKILSEM
PEVTELNPVHDAYVPVMKFKFNGVSIDLVYARLSLSVIPEDLDLSHDSILQHVSAGDEQT
VRSLNGCRVTDQILKLVPNIQNFRTTLRCIRLWAKRRGVYSNVAGFLGGINWALLVAFIC
QLYPNASPSVQVSRFFMVYTQWRWPNPIILCPIKEGLGQQVWDPRKNVRDRYHVMPIITP
AYPSMNSSYNVSCNTLSIMTGEFQRGYDICKAMEIATDKEADWGTLFESYAFFDAHKWYL
QIFISAGCADDFRKWKGWVESRLRQLTLIVENETHGKLQCRPYPGDFSDKSLTFHNCSFF
MGLQPNPQFPANRGEKLHFDLTRCAGEFKWAVKNGYTSRKTGMDIGVSLVKKIPEFVFPG
GIRPSCTPNVTRERRKRSPQPETSSDIDEGKSKATVLDGTCRDQKRKREYNAGVVTHPSS
RHPKSMRCNPPVDTLVADASSNQAEKLAPEPNVADQALPKQRDEREDDRHQVKEFAGGNM
SSGHVMREIKYDNAPRPSAASSYNDNLEELEVLHYQTPPQPVVKPIIRVNFISC
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgggtccaatttcattgtctggaccaactgagtttgatgtaatgaagagtcgtgaactt
gaaaggtatttgcgcaacgatgcagggatttatgagtgtagggaggagtctgtgatgagg
gaggaagttctgggcagacttgacgagattgtaaagcaatgggttaaagcagtttgccaa
gccaaaggtttgggtaaggaatttgtagaagaagcaaatgccaagattttcacctttggg
tcatacaggttaggagttcatagccctggtgcagatatagatacactctgcgtcggaccg
gcatacgtaacaagagaagagggtttctttggggagctgtacaagatcttgtctgaaatg
ccagaagttactgagttgaatcctgtgcatgatgcttatgttccagttatgaagttcaag
ttcaatggggtttccattgatcttgtttatgcaagactatcgctttcggttattcctgaa
gacttggatttgtcacatgactcgatcctacaacatgtcagtgctggtgatgaacaaact
gttcgaagcctcaatggttgcagagttacagaccaaattctgaagttagtcccaaatatt
cagaattttcgcacaacattaaggtgcattagattatgggcaaagcgtcgcggtgtttat
tcgaatgttgcagggtttcttggtggtataaactgggcattgcttgtggctttcatatgc
caactgtacccaaatgcatctcctagtgtacaggtgtctcggttcttcatggtctatact
cagtggcgttggccaaatcctataatactctgccctatcaaagaagggcttggacaacag
gtttgggatccaagaaaaaatgtaagagacaggtaccatgtcatgcctataattactccc
gcttatccttccatgaattctagctacaatgtgtcgtgcaatactttgagtatcatgaca
ggggaatttcagaggggatatgacatttgtaaggccatggaaattgcaacagataaggag
gctgattggggtacccttttcgagtcgtatgctttctttgacgcacataaatggtacttg
cagatattcataagtgcaggttgtgctgatgactttaggaaatggaaaggctgggttgag
tcgcggcttcgtcaactaacactaatagttgagaatgaaactcacggcaagttgcagtgt
cgcccataccctggtgatttttcagataaatccctaacttttcataactgctcattcttc
atgggattacaacctaacccacaatttccagccaatagaggtgagaagcttcattttgat
ctaactagatgtgctggtgagtttaagtgggctgtgaagaatggttatacatcaaggaag
actggaatggacattggcgtgtcccttgtaaagaaaatccctgagttcgtatttcctgga
gggatccgaccttcgtgtacacctaatgtaactagggagagaaggaaacgttcccctcaa
ccagagacttcaagtgatatagatgaaggtaagtctaaagcaactgttctagatggaaca
tgtagggatcagaagagaaaaagggagtataatgctggtgtagtgactcacccctcatct
aggcaccccaagtctatgaggtgtaacccaccagtcgacactcttgttgccgatgcatct
tctaatcaagcagagaaactggcaccagagccaaatgttgcagaccaagctttgccaaaa
caaagggatgagcgtgaagatgatcgacatcaagtcaaagaatttgcaggtgggaacatg
agcagcggtcacgtaatgagggaaataaaatatgacaatgcacctaggccttccgctgct
tcttcatataatgacaacttggaggaacttgaagtgctgcactatcaaacccctcctcaa
cctgtggtgaagccaatcataagagtgaatttcatttcatgttga
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