Fragaria vesca (woodland strawberry): 101295039
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Entry
101295039 CDS
T02666
Name
(RefSeq) nuclear pore complex protein NUP155
KO
K14312
nuclear pore complex protein Nup155
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101295039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101295039
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101295039
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
101295039
NCBI-ProteinID:
XP_011463170
LinkDB
All DBs
Position
LG4:19194899..19202625
Genome browser
AA seq
1487 aa
AA seq
DB search
MSQEDGVKLRDVTSTGIVISNRIGKEVASQLDLEESLEASRYASHPYATHPREWPPLAEV
VDTWELPPVLIERYNAAGGEGTTLCGIFPEIRRAWASIDNSLFLWRFDKWDGQCPEYSGE
DQAICAVGLAKSKPGVFVEAIQYLLILATPVQLSLVGVCCSGGGDGTDPYAEVTLQPLPD
YTVPSDGITMTCITCTEKGRILLAGRDGHIYELHYSTGSSWQSRCRKVCLTAGVGSIISR
WVVPNVFKFGAVDPIIEMVFDNERHILYAKTEEMKLQVFVLGQNANGPLKKVAEEKNLIN
LRDVHYGGRQATGPRAPNRTTKSSIVCISPLSTLESKSLHLVAVLSDGRRMYLTTSPSSG
NLGGFNTDRDKPSCLKVVTTRPSPPLGLSGGLAFGSMSLAGRPQNDDLSLKVEAAHYSAG
TLVLSDSSPPTMSSLLIVNRDSSTLSAGSSTLGTSSRSSRALRESVSSLPVEGRMLFVAD
ILPLPDTATAILSLYSAIEYGGYESLEESCEKVSGKLWARGDLSIQHILPRRRFVVFSTM
GMMEIVFNRPVDILRRLFESNSPRSILEEFFNRFGPGEAAAMCLMLAARVVHSENLISNV
VAQKAAEAFEDPRYVGMPQLEGNNALSNTRTAAGGFSMGQVVQEAEPVFSGAHEGLCLCS
ARLLFPVWELPVVIVKGSLGSTGAISENGLVVCRLSIEAMQVLENKIRSLEKFLRSRKNQ
RRGLYGCVAGSGDLTGSILFGASSELGAGDHMVRNLFGAYSRTTESNAGGSSNKRQRLPY
SPAELAALEVRAMECIRQLLLRSSEALFLLQLLSQHHVTRLVESFDANLRQSLLQMTFHQ
LVCSEEGDRLATRLISALMEYYTGPDGRGAVDDVSSRLRDGCPSYYKESDYKFFLAVECL
ERAAVLPDPVEKDNLARKAFDFLSKVPESADLRTVCRRFEDLRFYEAVVRLPLQKAQALD
PAGDAFNDQIDAADREYAVAQRVQCYEIIISALRSLKGDPSQREFSSPLRRAAAQPVLDQ
ASRNKYICQIVQLGIQSPDRLFHEYLYRAMIDLGLENELLENGGPDLVPFLQSAAREHIQ
EVRAISAVTSVASPMGHPGTSIPSNQAKFSELLARYYILKRQHLLAAHVLLRLAERRSPN
SGDVPTLDERYNYLKNAVIQAKNASSDGLVGSAHGAYDNGLLELLEGKLAVLRFQIKIKQ
ELEVLVSKAEDLPDASESNGTDPNSTETADSNFINIAREKAKELSLDLKSITQLYNEYAV
PFELWEICLEMLYFASYSGDPDSSMVRETWARLIDQSLSRGGVAEACSVLKRFGADIYPG
DGAVLPLDTLCLHLEKAALERQESGVESVGDEDVARALLAACKGATEPVLNTYDQLLTSG
AILPSPNLRLRLLRSVLVILREWAMSLFAQRMGTSNTGASLILGGTFSGEQRTVINQGVR
DKISSAANRYMTEVRRLALPQHLTEPVFQGFRELEESLLSPFPFDRY
NT seq
4464 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaggaggacggcgtcaaactgcgtgacgtcaccagcacgggcattgtcatcagt
aaccggatcggtaaagaagtcgcgtcccagctcgatctcgaagagtcactagaagcttcc
cgatacgcaagccacccctacgctactcatcccagagagtggccgccgttggcggaagtg
gtggatacttgggagctgcctccggtgcttatcgagagatataatgcagctggcggggaa
ggaactacattgtgtgggatatttcctgagattcgcagggcgtgggcatcgatagataat
tccttgtttctgtggcgtttcgacaagtgggatggacaatgtcctgaatatagtggggag
gatcaagctatttgtgctgttggccttgctaaatctaaacctggtgtttttgttgaagct
attcagtatcttttgattttggcaacacctgttcagttaagtcttgttggagtgtgttgc
tctggagggggtgatggcacagatccatatgcagaggtcacactacagccattgccagac
tatactgtaccgtctgatgggatcaccatgacttgtatcacatgtacggagaagggtcgt
attttactggctgggcgtgacggccacatctatgagttacattattcaactggatcaagc
tggcaatcaagatgtaggaaagtttgtctgactgctggtgttggaagtattatttccaga
tgggtggtacctaatgttttcaagtttggagctgttgatcctatcattgaaatggtgttt
gataatgagagacacatattgtatgcaaaaactgaagaaatgaaactccaggtttttgtt
ctggggcaaaatgctaatggaccattaaagaaagtggcagaagaaaaaaatttgatcaat
ctgagggatgttcattatggaggtagacaagcaactggacctagagctccaaatagaacg
acaaagtcatctatagtttgtatatcaccattgtctactcttgaatcgaagtctctacac
cttgtcgctgttttgtcagatgggagaaggatgtaccttaccacttctccatctagtggg
aatttgggtggttttaatacagaccgtgacaaacctagctgtttaaaagttgtgacaact
aggccttctcctcctctagggcttagtggtggacttgcctttggatcaatgtctcttgct
ggtagacctcagaatgacgatctctccctaaaggttgaggctgcacattattctgctgga
actcttgtcctttctgattcatctccgccaacaatgtcatctcttcttattgtaaaccgt
gattcaagcacgctatctgctggttcaagtactctggggacaagttcaaggagttctcgg
gcattacgggaatctgtgtcttctttaccagttgaagggcgaatgctttttgttgcagat
attttacccttgcctgatactgcaaccgccatactgtctttgtattcagcaattgaatat
ggtggatatgaaagccttgaggagtcatgtgagaaggtatctggaaagctttgggccaga
ggcgatctttcaatccaacatatattaccaaggaggcgatttgtcgttttcagtactatg
ggcatgatggaaatagttttcaataggccagtagacattctgaggaggttgtttgagtcc
aactcacccaggtcaatcttggaagaattcttcaatcgttttggtcctggtgaagcggct
gccatgtgtttaatgctagcagccagggtagtccattctgaaaatcttataagcaatgtt
gttgctcagaaggcagctgaagctttcgaggacccaagatatgttggaatgccacaactg
gagggaaacaatgcattatccaacactagaacagctgcagggggatttagcatgggacag
gttgttcaggaggctgagcctgtgttttcaggtgcacatgaagggctttgtttatgctct
gcaaggttgctttttcctgtctgggaacttcctgtggtgattgtaaaaggcagtttgggt
tccacaggcgctatttcagaaaatgggttagtcgtatgcaggctctctattgaggctatg
caagtgcttgaaaacaaaattcgttcactagagaagtttctaaggtctagaaagaaccaa
aggaggggcctttatggctgtgttgctggttcaggagacttgactggctctattcttttt
ggagccagttcagaactaggtgctggtgaccacatggttagaaacttatttggtgcctac
tctcggactactgagtctaatgctggtggctcatctaataaaaggcagagattaccatat
agtcctgctgaattggcagccttggaggtcagggccatggaatgcattaggcagttacta
cttcgatctagtgaagccttgtttctgctccagcttctttcacagcaccatgtaactcgc
ttggtcgagagctttgatgctaatctacgacaatcattacttcaaatgacattccatcag
ttagtttgctctgaggaaggagaccgtcttgctacgaggctcatatctgctctaatggag
tattatactggtcctgatggcaggggggcagtagatgatgttagttcaagactacgggat
ggttgtccaagctactataaggagtctgattacaagttttttctagcggtagagtgtctt
gagagagctgctgtacttccagatcctgtggagaaagataatcttgcaagaaaagccttt
gactttttaagcaaagttccagaatctgctgatttacgaactgtttgcagacggtttgaa
gatttaagattttatgaagctgtggttcgcttacctttacaaaaggcacaggctcttgac
cctgcaggtgatgcttttaatgaccaaatcgatgcagcagatcgagaatatgcagttgct
caacgtgtacagtgttatgaaattatcatcagtgcactgcgttctctaaaaggtgaccct
tcacagagggagttcagttctcctcttaggcgtgctgctgcacagcccgtccttgatcag
gcctctcggaacaagtatatatgccagattgttcagcttggcatccaatctcctgacaga
ttatttcatgagtacttgtaccgtgctatgattgatttgggacttgaaaatgagttgttg
gagaacggaggtcctgatctagtaccctttttacaaagtgctgcccgtgaacatatacaa
gaggttagagctatttcagcagtgacctccgtggcttctccaatgggacatcctggaaca
tctattccatccaatcaagccaaattttctgagcttttggcacggtactatatcttgaag
aggcaacatctgcttgcagctcatgtattgttaagactggcagaaaggcgatcccctaat
tcaggggatgttcctactctagatgaaaggtacaactacttgaaaaatgcagtcatacag
gcaaaaaatgctagtagtgatggcctggtaggctctgcacatggtgcttatgataatggg
cttttagaattgttggaaggaaagcttgctgttctccgttttcaaataaagatcaaacag
gaacttgaggttttagtctctaaagcagaagatttgcctgatgcatctgagtccaatgga
actgaccccaatagcactgaaacggctgattccaatttcataaatattgcacgagaaaag
gctaaagagctatctttagacttgaagagtataactcagctatacaatgagtatgctgta
ccatttgaactttgggagatttgtctggagatgctgtactttgcgagctattctggtgat
ccagatagtagtatggttagagaaacttgggccagattgattgaccaatctctttcaaga
ggtggtgttgctgaagcttgttcagtattgaagagatttggtgctgacatttatcctgga
gatggagctgtgttacccttagacacactttgtcttcatcttgagaaagctgcactggaa
agacaggagtccggggttgagtctgttggagatgaagatgtagcaagggctcttcttgct
gcttgcaagggtgcaactgagcctgtattgaacacatatgatcagttattaacaagtggt
gctatcttaccctcacccaacctcaggctacgccttctccgttcagtactcgtgatactc
cgggagtgggcaatgtcattatttgcacagagaatgggtacaagtaataccggagcttct
ttaatattaggtggaacattttcaggggagcagagaacagtcattaaccagggggttcga
gataagatctctagtgcagccaacaggtatatgactgaggtacggaggttggctcttcca
cagcatcttactgaacctgttttccaggggtttcgagaacttgaagagtcgctcttgagt
cccttcccttttgatcgttattga
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