Fragaria vesca (woodland strawberry): 101295134
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Entry
101295134 CDS
T02666
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170-like
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fve04121
]
101295134
Enzymes [BR:
fve01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101295134
Ubiquitin system [BR:
fve04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101295134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4_3
zf-RING_2
zf-C3HC4
zf-C3HC4_4
zf-RING_5
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
101295134
NCBI-ProteinID:
XP_004299808
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Position
LG5:complement(14305584..14312025)
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AA seq
185 aa
AA seq
DB search
MDGPPENDQCSVCHSGFNTPCQANCSHWFCGKCIMLVWDHGSALQPCKCPLCRRQITLLV
PTEASLSQRNTPEVAEILGKVETYNRYFGGQSRGLIQRMQDLPFLLRRLLREVLDPRRSL
PLVIRARVIIATILTGAYILSPVDFIPEAIFGIVGLLDDLLITLVVFLHIATIYQSVLYQ
RHGGS
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggacggtcctcctgaaaacgatcagtgctccgtctgccacagcggcttcaacactcca
tgccaagccaattgctctcactggttttgcggaaagtgtattatgcttgtttgggatcac
ggatcagctcttcagccttgtaaatgccctctctgtcgtcgccagataaccttgctggtt
ccaactgaggcttcattgagccaacgtaatacgcctgaggtggctgagattctaggcaag
gttgaaacgtataatcgctattttggaggtcaatccagaggacttattcagagaatgcaa
gaccttccttttcttttgcggaggctgttacgagaagtattggatccgcgtagatcgctt
ccccttgttataagggctcgtgtcattattgcaacgatactaactggtgcctatatactc
agtcctgttgactttattccggaagcaatatttggtatagttggtctgttagatgatctc
ctcatcacactagtggtcttcctccacattgctaccatttatcaatcggtactctatcaa
cgccatggaggttcttaa
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