Fragaria vesca (woodland strawberry): 101295255
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Entry
101295255 CDS
T02666
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B
KO
K15559
regulator of Ty1 transposition protein 103
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fve03021
]
101295255
Transcription machinery [BR:
fve03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
101295255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
ALIX_LYPXL_bnd
CREPT
Nuf2_DHR10-like
CTK3
PspA_IM30
LMBR1
DUF6175
P4Ha_N
TMF_TATA_bd
Motif
Other DBs
NCBI-GeneID:
101295255
NCBI-ProteinID:
XP_004304537
LinkDB
All DBs
Position
LG6:36381761..36386528
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AA seq
513 aa
AA seq
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MGSAFNPQILVEKLAKLNSSQASIETLSHWCIFHMNKARQVVETWARQFHSSPREQRLAF
LYLANDILQNSRRKGAEFVGEFWKVLPDALRDVIQNGDEFGKNAAQRLINIWEERKVFGS
RGQILKEEFVGRQVENNNRNGKHLVVRPPAGTSLDKIVSDYQAIYGQTDEDTILRKCKNA
INCLEKADKEVAGDFNSGAAFAEEVHGQHAILRDCIDQLTAVESSRATLVSHLKEALQEQ
EFKLDQLRNQLQAAQSQSEQASTFCRQLMSSSNNLQPIDQSSKEAHTSAAPHSFMAVGRE
QSAPVMYTQQVPFAEKSGQVEEDPLKSAAAAVAAKLTASTDSAQMLSYVLSSLASEGVIS
NPVKGSSGDYPSEKRLKLNSDDQLSSYVPRSPNPSASSPFSHSESLQLNVSATSQQYTPT
EPPPPPSSPPPLPPLPPVSQYPVSQYLQAPSFTYSIAQPQTSAVPGYTPVGGAQVNGLQP
LMAPANPYQSFQGSDGKFYSQQSSMQLAPMSRQ
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgggaagcgcattcaatcctcagattttagtggagaagctagccaagctcaacagctcg
caagcgagcatagagactttgtcacattggtgcattttccatatgaataaagcaaggcaa
gttgttgaaacttgggccaggcaatttcattcttctccgcgcgaacaaagattggctttt
ctgtatcttgcaaatgatattttacagaacagtaggagaaaaggtgcagagtttgttggt
gagttctggaaggttcttccagatgctcttcgtgatgtaattcagaatggagatgaattt
ggaaaaaatgcagcacaacgactgattaatatttgggaagaaagaaaagtgtttggttct
cgtggccaaattctaaaggaagaatttgtaggaaggcaggtggaaaataataatagaaat
gggaagcatttggtggttagaccgcctgctggaacttcattggacaagatagtttccgat
taccaagctatttatggccagacggatgaagacactatcttgagaaaatgtaagaatgct
atcaactgtcttgagaaagcagacaaggaagttgctggtgatttcaattcaggagctgca
tttgcagaggaagtgcatgggcagcatgctattctgagggactgtattgatcaactaact
gcagtggaatcatcgagagctactcttgtgtctcatctgaaagaggctctgcaagagcag
gaattcaagttggatcaactccgaaatcaacttcaggcggcacagtcacagtcagaacag
gccagtactttctgccgtcagttaatgagtagcagcaataatttgcagccaatagatcag
agctcaaaagaagctcatacctctgcagcacctcacagctttatggcggtgggtagagag
caatcagctccagtaatgtacacacagcaggtcccttttgctgaaaaatctggtcaggtg
gaggaagatcctctcaagtctgcagctgctgcagtggcagcaaagctaaccgcatcgaca
gactcagcccagatgctctcttatgtcctctcctctctggcgtcagagggtgttatcagc
aatccagttaaagggtcttctggtgattatccatctgaaaagagacttaaactcaatagt
gacgaccaattgtcatcttatgttccccggagtcctaacccatctgcatcttctcccttc
tcacattctgaatcactccagctcaatgtgtctgccaccagccaacaatatactcctacc
gagccgccacctcccccatcatctcctccaccattgccaccgttaccaccagtatcacag
tacccagtatcccagtatttgcaggctccatcttttacttatagcatagcccagccgcag
acatcagcagtgcctggttatacaccagtaggaggagctcaagtgaatggtcttcaacct
ttgatggcaccggcaaatccttatcagagtttccaaggatcagatggtaaattctacagc
caacaatcatccatgcaattggcgccaatgtctaggcaatga
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