Fragaria vesca (woodland strawberry): 101295277
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Entry
101295277 CDS
T02666
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fve03021
]
101295277
Transcription machinery [BR:
fve03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
101295277
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
GerE
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
101295277
NCBI-ProteinID:
XP_004308009
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Position
LG7:complement(21776635..21779615)
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AA seq
520 aa
AA seq
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MGVVTVSSSVSRTPLGLSTNLVSSQRSTLRKPLIVAFRTDKSDKKALVAPQEKVPLPIET
GKKVQKRLGKARKLPKSVKAALIEEAPTCDLELDYNEAAAKLENLYKRSPETEASDVENV
DGLMIKRGRKRRKKISEVDDKVEKRTSDDIVVRSVTKKAKRLSLDKRVALKWNKDEKVAA
SVVRKRKDKRSENEMMEELVREYSASTDLVSLDWKKMRIPPVLSSSEHTWLFKLMQPMKG
LLEVKEILQKDLGREPNKGELAEATNMTVVQVKRHLEVGRAARNKLIKHNLRLVLFVINK
YFQDFANGPKFQDLCQAGVKGLITAIDRFEPQRRFRLSTYGLFWIRHAIIRSMTLSSFTR
VSFGLESVRAEIQKAKLEMLVQLKRMPTEDEIIEKVGISPERYHEVMRASKPVFSLNSRH
SVTQEEFINGITDVDGVDGDNRRKPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGDRT
LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIV
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgacagtttctagttcagtttctaggactccattaggattgagcacaaac
ttggtgtcgagtcagagatccacattgagaaagccgttgattgttgcctttagaacagat
aaatccgataagaaagcattggttgcgcctcaggagaaagtacctttgccaatagaaaca
ggaaagaaggtacaaaagagactagggaaggctagaaagctccccaagagtgtaaaagct
gcattgatagaggaggctcctacttgtgatttggaattggattacaatgaagctgctgcc
aagctggaaaacctgtacaagcgcagccccgagactgaagcttcggatgtggaaaatgta
gatggcttgatgatcaagagaggtcgcaaaaggaggaagaagatcagtgaagttgatgac
aaagtagagaagagaacaagcgatgacattgtggttaggagcgtgacaaagaaggctaaa
agattgagtcttgataaaagggttgcattgaaatggaataaggatgagaaagtggctgct
tcagtagttcgaaagagaaaagataaaaggagtgagaatgagatgatggaggagcttgta
agggagtattcggcttcaactgatcttgtcagtttagattggaaaaagatgaggattcct
cctgttcttagttcctctgagcatacttggttgttcaagctaatgcaacctatgaagggt
cttcttgaagtgaaagagattttgcaaaaagatttggggagagaaccaaataagggtgaa
ctagctgaggcgacaaatatgactgtggttcaagtgaaaaggcacttggaggttggtcga
gctgcaagaaacaaactcatcaagcacaatctccgacttgtgttatttgtcattaacaaa
tactttcaagactttgcaaatggtccaaaatttcaagacctttgccaggcaggagtgaag
ggacttatcacggcaattgatcgctttgaaccacaaagaagattccggctttccacatat
ggtcttttctggatcaggcatgccatcatacgctccatgacactatcaagctttactcgt
gtctcctttggccttgagtcggtcagggcagaaatccagaaagctaagcttgaaatgttg
gttcagctcaaaagaatgccaacagaagatgagataattgaaaaggttggaatttcccct
gagaggtatcatgaagtaatgagggcctcaaagcctgtcttctctcttaattcaaggcat
tcagtcacacaagaagaatttataaacgggattactgatgttgacggcgttgatggtgat
aaccggcggaaacctgctcttctcaggcttgctattgatgatgtgcttgattccctgaag
ccaaaggaaagcttggtgatcagacagagatatggcctcgatggcaagggcgacagaaca
ttaggggagatagccggaaacttaaatatttcaagagagatggttcggaagcatgaagtt
aaggccctcatgaagctcaagcatccagcccgagtagactatcttcgcagatacatagtc
tga
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