Fragaria vesca (woodland strawberry): 101295294
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Entry
101295294 CDS
T02666
Name
(RefSeq) autophagy-related protein 18b
KO
K17908
autophagy-related protein 18
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
101295294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fve04131
]
101295294
03029 Mitochondrial biogenesis [BR:
fve03029
]
101295294
Membrane trafficking [BR:
fve04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
101295294
Mitochondrial biogenesis [BR:
fve03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
101295294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_Vps41
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
BCAS3_WD40
WD40_MABP1-WDR62_1st
WDR54
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
101295294
NCBI-ProteinID:
XP_004309781
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Position
Un
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AA seq
372 aa
AA seq
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MANQSSSSSSYPVLCASFNQDSSCFAIGTKHGFRVFDSNTGRLCYERAIGAFVIVEMLFC
SSLLAIVGAGEEPSLSPRRLCLFNKTTGTALRELNFLTSILAVRMNRKRLVVILQDKTYV
YDINSLAILDTIDTVSNLKGLCAFSPSLDGCFLAIPASISKGSVLLYNVMDLHLHCEIDA
HRAPLAAIALSSNGMYIATASEQGTIIRVHLVSEATKSYSFRRGTYPSTIFSLSFAPSTQ
LPDVLVCTSSSGSVHAFSLGFSGYQRSKRSGSFLGSIIPDSVTDALDPAYHDVLHNVAPV
GVKSYAVIRKIEKVADASTSDIVACRATISIISYSGYFQEYNLSINNQNEFLWSLEREFK
LLNVILDDAISL
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccagtcctcctcctcttcttcctacccagtcctctgcgcttccttcaaccaa
gactccagttgctttgccataggcacaaagcatggcttcagagtcttcgattccaataca
ggcagactctgctatgaacgagctattggagctttcgttattgttgaaatgctgttttgc
tctagtcttcttgccattgttggagctggtgaagagccatctttatcgccgcgccgtctc
tgtttgttcaataaaacaactggaactgctctccgtgaattgaattttttaacttcaata
cttgccgttcgtatgaataggaaaagacttgttgtcatcttacaagacaaaacatatgta
tatgacataaatagtcttgcaatcttggacactattgatactgtatcaaatttaaaaggg
ctttgcgcattctccccaagtttggatggatgtttcttggctatacctgccagcatctcc
aaaggatccgtgttgttgtacaatgttatggacctgcatttacattgtgagattgatgct
catagagccccacttgctgcaattgcactttcttccaatgggatgtacatagcaacagca
tccgaacagggaaccattatcagagtccatctagtctcagaagcaacaaagtcatatagc
ttccggagagggacatatccatcaactatattctccttatcatttgcgccatctacgcaa
ctgccagatgttctcgtgtgcacaagttcatcagggtctgttcatgctttctcgcttggg
ttttctggttaccagaggagcaaaagatcgggaagttttcttggatcaattatacccgac
tctgttactgatgcactagatccagcatatcacgatgtacttcataatgttgcacctgta
ggggttaaaagctatgcagtgattcgtaagattgagaaggttgctgatgcatcaacttca
gatatcgtggcatgtcgggccactatttctattatcagctacagcgggtacttccaggag
tacaacttaagcatcaacaatcaaaatgagttcttgtggagtttggagcgtgaatttaag
ctactgaatgtcattttagatgatgccatcagcttgtaa
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