Fragaria vesca (woodland strawberry): 101295340
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Entry
101295340 CDS
T02666
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00900
Terpenoid backbone biosynthesis
fve01100
Metabolic pathways
fve01110
Biosynthesis of secondary metabolites
Module
fve_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
101295340
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
fve01006
]
101295340
Enzymes [BR:
fve01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
101295340
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
101295340
2.5.1.29 geranylgeranyl diphosphate synthase
101295340
Prenyltransferases [BR:
fve01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
101295340
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Zea_mays_MuDR
UbiA
Motif
Other DBs
NCBI-GeneID:
101295340
NCBI-ProteinID:
XP_004300598
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All DBs
Position
LG5:complement(26664513..26666013)
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AA seq
360 aa
AA seq
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MSCVNLSSWGQACSMLNRSRSSPSLLLLHPTRPVSFSSHKRRRPSSVAAILTKKESAVNE
ESTKPSINFKTYMVEKAESVNRALDAAVSLKDPVTIHEAMRYSLLAGGKRVRPVLCLAAC
ELVGGDESVAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDA
LLSFAFEHLAVSTVGVEPSRIVRAVEELARSIGSEGLVAGQVVDIHSEGLSDVGLEQLEY
IHIHKTAALLECAVVLGSILGGGSDTEIEKLRTFARYIGLLFQVVDDILDVTKSSQELGK
TAGKDLLADKVTYPKLMGIEKSREFAEKLNRDAQEQLVGFNSEKAAPLIALANYIAYRQN
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgagctgtgtgaatctgagctcatggggccaagcctgctcaatgttgaaccgatccaga
tcctccccatctctcctcctcctccacccgacccgacccgtttccttctcttcccataaa
cgccgccgccccagctccgtcgcagcaatcctgacgaagaaggagtccgccgtgaacgaa
gaatcgacaaaacccagtatcaatttcaagacttacatggtggagaaggccgagtccgtc
aaccgggccttggacgccgccgtgtcgctgaaagacccggtcacgatccacgaggcgatg
cggtactctctcctcgccggaggcaagcgggtccgacccgttttgtgtctcgcggcttgc
gagctcgtcggaggcgacgagtccgtggcgatgccggcggcctgcgccgtcgagatgatc
cacaccatgtcgctgatccacgacgacttgccgtgcatggacaacgacgacctccgccgt
gggaaacccaccaaccacaaggttttcggcgaagacgtcgccgttttagccggcgacgcg
cttctctccttcgcgtttgagcacctcgccgtctccaccgtcggcgtcgagccttctaga
atcgtcagagcggttgaggagctcgcccggtcaatcgggtcggagggattggtggcgggt
caagtcgtggatatccactccgagggattatccgatgtgggactggagcagctggagtac
atacacatccacaaaactgctgctcttcttgaatgcgcggtcgttctcgggtcgattttg
ggcggcgggtcggacacagaaatagagaagctccggacttttgctaggtacattggattg
ttgtttcaagttgtggatgacattctggatgtgacaaagtcttcacaggaattggggaag
actgctgggaaggacttgttggctgataaggtgacttatcctaagctgatggggattgag
aaatcgagggagtttgcggagaaacttaacagggatgcacaggaacagctcgtcggattc
aactccgaaaaggctgctcctttgattgctttggctaattacattgcttacaggcaaaac
tga
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