Fragaria vesca (woodland strawberry): 101295396
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Entry
101295396 CDS
T02666
Name
(RefSeq) lariat debranching enzyme
KO
K18328
lariat debranching enzyme [EC:3.1.-.-]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fve03041
]
101295396
03009 Ribosome biogenesis [BR:
fve03009
]
101295396
Spliceosome [BR:
fve03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101295396
Ribosome biogenesis [BR:
fve03009
]
Eukaryotic type
90S particles
RNase
101295396
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DBR1
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-GeneID:
101295396
NCBI-ProteinID:
XP_011459630
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All DBs
Position
LG2:33228775..33233124
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AA seq
410 aa
AA seq
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MKFAVEGCMHGDLDNVYRTLQHIEKVQNIKIDLLLCCGDFQAVRNEKDLESLSVPPKYRA
MNSFWKYYSGEEIAPYPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGFAGVVKFGNIRI
GGLSGIYKSRDYRSGHYERPPYNENTIKSVYHVREYDVHKLMQVEEPIHIFLSHDWPLGI
TDCGDWKQLVRYKPHFETEVRERTLGSKAAAQLLEKLKPPYWFSAHLHCKFAARVQHGQD
GPVTNFLALDKCLPGKKFLQVLDVDSEPGPYEIQYDEEWLEITRRFNPVFPLTIRSANFG
GVHIDKQDYRQWVRSKLQARGARPFEFSQTAPSYNPSNSVSYASLPGYTRNPQTESLLQF
LELPYLLDDTSESSEVFKGPFPSSDRDDSEEIPIDDVDELEELAEEAGDV
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgcagttgaaggttgtatgcacggtgacctcgacaatgtctacagaacgctc
caacacatcgaaaaagttcaaaacatcaaaatcgacctcctcctctgctgcggggacttt
caggctgtgaggaatgagaaggatttggagagcttaagcgtgcccccaaagtaccgtgcc
atgaactcgttctggaagtactactccggcgaggagattgctccgtatccgaccatattc
atcggaggcaatcacgaagcttctaattatctgtgggaattgtactacggagggtgggcg
gcccctaatatctacttcttggggtttgctggggttgtcaagttcggtaacattcgcatt
ggtggcctctccgggatttataaatcgcgagactatcgttctggacactatgagaggcct
ccttataatgagaataccatcaagtctgtatatcatgtccgtgagtatgatgtccacaaa
ctcatgcaagttgaggaaccaatccatatttttctttcacatgattggcctcttggtatc
actgattgtggggactggaagcaacttgtccgatacaaacctcattttgagaccgaggtt
cgggaaagaactctgggaagtaaagctgctgctcaattgctagaaaaattgaaaccaccc
tattggttttcagctcacctacactgcaaatttgctgctcgtgttcaacatgggcaagat
ggtcccgtgacgaattttcttgctcttgataagtgtcttccaggaaagaaatttttgcag
gttcttgatgttgactcagagccagggccgtatgaaattcagtatgatgaagaatggcta
gaaattactcgaagatttaaccctgttttccctctcacaatcaggagtgcaaattttggg
ggtgtacatattgacaagcaagattatcgtcaatgggtaaggagtaagctacaagcaaga
ggagcccgaccttttgaattcagccagacagctccatcttataatccctctaattctgtc
tcatatgcttctttgcctggatatactcggaatcctcaaacagaatctttattgcagttt
ctggaactcccttatcttcttgatgacacatcagaatcgtcagaagtattcaagggtcct
tttccatcaagcgatagagatgacagcgaagagattcccattgatgatgtggatgagtta
gaagagcttgctgaagaggctggagatgtttga
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