Fragaria vesca (woodland strawberry): 101295421
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Entry
101295421 CDS
T02666
Name
(RefSeq) transcription initiation factor TFIID subunit 4b
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101295421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fve03021
]
101295421
03036 Chromosome and associated proteins [BR:
fve03036
]
101295421
Transcription machinery [BR:
fve03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101295421
Coactivators
SAGA/TFTC/STAGA complex
101295421
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
101295421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
Motif
Other DBs
NCBI-GeneID:
101295421
NCBI-ProteinID:
XP_011465030
LinkDB
All DBs
Position
LG5:complement(19474719..19482342)
Genome browser
AA seq
958 aa
AA seq
DB search
MDPSIMKLLEDDEDETMHSGADVEAFQAALNRDIEGDVSALQQPSDSDSAVLSQGSNNTS
SQSLPQLQNARQDESTAGQIQHDQNIAQQRELPYEMELKQQRSISENMPQQSDASQERLN
HFPLPQKQPHGDLQQGQADQKPLQSGMLMSGKHPVSTQEQVLTPKPENDSQYAKLQKISS
QQAMTTEQPSIPANRSKQVPFGLLLPVLLPQLDKDRAMQLTTLFSKLKNNEISKDAFVRH
IRSVVGDQMLKMAVHKVQTQPVLKQQLTPQASLQQQPPRMPSINAGATQFTDPRSFAIQQ
RGVNPSTGPSHITTVPVQTDSSHSAIENSAKKLREAERQSDPHGMQINQMSSSSTGASNQ
ERDRSSVPMQVHSNQQQHQLHYPQSTFAMYGSTGGNYHPYPGTNVSTMPIKQQPHDSHLR
PIPQHQGMGSAQSVGGETQGTNIMSVPKLERQNSVNDPGRQQGGSLPHFTNSSTLQQHQI
PWQSSNKEQISGPSSSMAYVKQEPIDQSAEQQHKTPLSNNQRLPYASSLQLEQISASPGV
SMDESLEKQSSRMGFSSAGPPGSMVISSSTSTGPPLTPISSTTMTQADPNLGSKIPSGTP
AGTNNRIPAKKTSVGQKKPSEALGSPPPPSSGKKQKVSGAFSDQSIEQLNDVTAVSGVNL
REEEEQLFSGPKDDSRASEASRRVVQEEEERLILQKTPLQKKLAEIMFRSGLKSISHDVE
RCLSLCVEERMRGLINNLIRLSKQRVDAEKTKHHTIITSDVQQQIMNQNKKAKEEWEKKQ
AEAEKVRKLNEPDLSNGVDGDKDRDEGRSKSFKANKEDDDKMRTTAANVAARAAVGGDDM
LSKWQLMAEQARQKREGGSDVASGSQPGKDVNRKPTSAAGRIMKNNQEAEKRGGAAPVSV
AGTVRKFGKNQVMVPQTRVARSISVKDVISVLEREPQMSKSPLIYCLYEKNQSDSVSD
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atggacccgtcaattatgaagctcttggaagacgatgaggatgaaacaatgcattcgggg
gccgatgtggaggcctttcaggcggcactgaatagggacattgaaggagatgtctctgct
ttgcagcagccgtctgattcagactctgctgttttgtctcaaggaagcaataatacttct
agtcaatcattaccacaattgcaaaatgctaggcaggatgaaagtactgcaggtcaaatt
caacatgaccaaaatattgcacaacagcgagaactgccatatgaaatggagttaaagcaa
caacgttccatttctgagaatatgccccaacagagtgatgcatcacaggaacgacttaat
cattttccgttgccccagaagcaaccccacggagatcttcagcaagggcaagcagatcaa
aaacctctccagtctggaatgttgatgtccggaaagcatcctgtctcaacacaggagcag
gtcttaacacctaaaccagaaaatgattctcagtatgcaaagcttcagaagataagtagt
caacaggcaatgaccacggagcagccaagcatccctgcgaatcgcagtaaacaagtacca
tttggtctgttgctacctgtcttattaccccaacttgataaagacagagccatgcaactt
acaactctttttagtaaactgaagaacaatgaaatctccaaagatgcttttgttcgacac
attagaagtgttgttggggaccagatgctcaagatggcagtacataaagtacagacacag
cctgttctcaaacagcagttaacgcctcaggcttcattgcagcaacaacctcctaggatg
ccatctattaatgcaggtgctacccagttcactgatcctcgttcatttgcaattcaacag
agaggtgtgaacccttccactggtccatcgcacattaccacagttcctgtgcagactgac
tcaagccattcagccattgaaaacagtgccaaaaaattgcgggaagcagaacgtcagtct
gatcctcatggaatgcaaataaatcagatgtcttcttccagcacaggagcttccaatcaa
gaaagggaccggtcctcagttcctatgcaagtacatagcaatcagcagcaacatcaattg
cactacccgcaatcaacctttgccatgtatggatctactggtggaaattatcacccatat
ccagggacaaatgtcagtacaatgcctatcaaacagcaaccacatgactctcatttgagg
ccaattcctcaacatcaaggcatgggttcagctcagtcagttggcggagaaacccaggga
acaaacatcatgagtgttcccaaattggagaggcaaaattctgtgaacgaccctggcaga
cagcagggtggatctcttcctcacttcacaaatagttcgactttgcagcaacatcaaatt
ccttggcagtcttcaaataaagagcagatttctggcccttcatcatcaatggcttatgta
aaacaggaacccattgaccagagtgctgagcagcagcacaagaccccactatctaataat
cagcgtttgccttatgcttcttctctgcaacttgaacaaataagtgcttcacctggagtt
tcaatggatgagtctttagagaagcagtcttcaagaatgggattttcaagtgcagggccc
cctgggagcatggtgatttcctcatctacaagcacagggccccccttgactcctatttct
tcaaccacaatgactcaagctgatcctaatttaggctctaagataccttctggaactcct
gctggtactaataatagaatacctgcaaaaaaaacttctgttggccaaaagaagcctagt
gaagcacttggttctccaccaccgccttcaagtggtaagaagcaaaaagtgtctggggct
ttttcggatcaaagcattgaacaactcaatgatgtcacggctgttagtggagttaatcta
agggaagaggaggagcagctgttttctgggcccaaagatgacagtcgagcttcagaagca
tctcgaagagttgtgcaagaagaagaagaaaggctgattttgcagaagactcccttacag
aaaaaattggcagaaatcatgttcagaagtggtctgaaaagtataagccatgatgtggaa
cgatgcttgtcactgtgtgtggaggaaagaatgaggggactgataaataatttgataaga
ttgtcaaagcagcgggttgatgctgagaaaacaaaacaccacaccatcattacctcggat
gttcagcaacaaattatgaatcagaacaagaaagctaaagaagaatgggaaaagaagcag
gctgaggcagaaaaggtccggaagcttaatgaacctgaccttagcaatggagttgatggt
gataaagacagagatgaaggtcgttcaaaatcatttaaggcaaacaaagaagatgatgac
aaaatgaggacaacagcagcaaatgttgctgctcgtgctgctgttggaggagatgacatg
ctgtcaaaatggcaacttatggctgagcaagctcgccaaaaacgtgaaggtgggagtgat
gtggcatctgggtctcagccaggtaaagatgtaaatcgcaagcctacatcagcagctgga
agaattatgaagaacaatcaagaagcagagaaaagagggggtgcagctcctgtttctgta
gctgggactgttagaaagtttgggaaaaatcaagttatggtgcctcagacgagggtggct
cgtagtatatctgtcaaggatgtgatttctgttctggaaagggaacctcaaatgtccaag
tctcctttgatatattgcttgtatgagaaaaatcaatccgactctgtgagtgattaa
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