Fragaria vesca (woodland strawberry): 101295525
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Entry
101295525 CDS
T02666
Name
(RefSeq) RNA-binding protein NOB1
KO
K11883
RNA-binding protein NOB1
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101295525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fve03009
]
101295525
03051 Proteasome [BR:
fve03051
]
101295525
Ribosome biogenesis [BR:
fve03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
101295525
Proteasome [BR:
fve03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
101295525
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
Fucose_iso_N1
Motif
Other DBs
NCBI-GeneID:
101295525
NCBI-ProteinID:
XP_004300199
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Position
LG5:20633614..20636783
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AA seq
630 aa
AA seq
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MDATVTASPIPDPNPSPAPVSCWSNIVKKQPDPKPQNSASDASIAAGKVLVESCKSSKGI
AVAVVDANAIIQGGETLAHCADKFVSVPEVMAEIRDPISRHRLAVVPFQVQTMEPSPDSL
NKVIKFARATGDLQTLSDVDIKLIAMTYTLEAEIHGTEHLRECPPPVHTVNVRRLPEKDL
PGWGNNVPNLEEWEALENEAELKLNPESRILPLKDINLNVIDESEGRSVDGSAVVEVKSD
VCSENQEGGEGNQGRHRRFFSKKKEVKIEGKMVSDGIDASQGQVDDNAGDWMPAVSRSTH
RRFLRRKARRESCEASANNDSQQDAEEKSSGDVIVDAKGQDQTLPSNSEEGCCRAVEREM
TVEKNCDEDLSSILEQTRQNGVEDNNFNAGESTSDNGVNLSVEGDEAEVINEGLDHLEIS
SDNDESVDTSNVNDDSSEQSWMLRSLSESSVACITSDFAMQNVILQMGLRLLAPGGMQIC
HLHRWILKCHACNTVTAEIGRMFCPKCGNGGTLRKVAVTVGENGIILAARKPRITLRGTR
FSLPLPQGGRNAITKNPVLREDQLPQKYLHPKTKKKANKPGDDDLFTSSNFIFHHHSDKK
APLQPPIRKALAAFSGRRNPNDNHYSHSRH
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggacgccaccgtcaccgcatccccaatacccgacccgaacccgagcccggccccagtc
tcctgttggagcaacattgtcaagaagcagccggacccgaagccccaaaactcggcctcc
gacgcctcaatcgccgccggcaaagtcttggtcgaaagctgcaagtcctccaagggcata
gccgtcgccgtcgtcgacgccaatgctatcatccagggcggcgagaccctcgcccactgc
gccgacaagttcgtctccgtgcccgaggtcatggccgaaatccgtgaccctatctcccgc
caccgcctcgccgtcgtccccttccaggtccagaccatggagccctcccctgattccctc
aacaaagttattaagtttgccagggctaccggggatttacagacactttctgatgtggat
attaagctcattgctatgacttatacattggaggctgagatacatggcactgagcatctt
agggagtgccctccgccggtgcatactgtcaatgtgaggaggttgccagagaaggacttg
cccgggtggggaaacaatgtgccgaatttggaagagtgggaagcgctggagaatgaagcc
gagcttaagttgaaccccgagtctaggattcttccgttgaaggatataaacttgaatgtt
attgatgagtccgagggccggtctgttgatggttctgctgtggtggaagttaagagtgac
gtttgtagtgagaatcaggagggtggtgagggaaatcaggggagacataggaggtttttt
tcgaagaagaaagaggtgaagattgaagggaagatggtttctgacggaattgatgcgtcc
cagggacaagttgatgataatgctggtgattggatgcctgctgtcagtcgaagtacgcat
aggaggtttttgagaaggaaagctagacgcgagtcttgtgaggcatctgccaataacgat
tctcagcaagatgctgaagaaaagtcaagtggtgacgtaattgtggacgctaaaggccag
gatcaaacattgccttctaactctgaagagggatgttgcagagctgtggagagagagatg
acagtggagaagaattgtgatgaagacctttcctcaatcctggagcaaacaaggcagaat
ggggttgaggataataatttcaacgcaggggaaagcacttctgataatggtgtgaatttg
tctgttgagggagatgaggctgaagtgataaatgaaggactggatcacctggagatctca
agtgataatgacgaaagtgtggatacatcaaatgtgaacgatgatagtagtgagcagagc
tggatgctacgatccttgtctgagtctagtgtagcttgtataacaagtgattttgcaatg
caaaatgttattctgcaaatgggtttacggttgttggcacctggaggaatgcagatctgc
catctgcataggtggattttgaaatgtcatgcttgtaacactgtgaccgctgaaattggg
agaatgttttgtccaaagtgtggaaatggtggtaccttgcgcaaggtagctgtaacagtg
ggtgagaatgggattattcttgcggcacgtaagcctcggatcacgttgcgtggcacaaga
ttttcacttcctttacctcaaggtggaagaaacgccattactaagaacccagttttacgt
gaagatcagctcccacaaaagtaccttcatccaaagacaaaaaagaaagcaaataagccg
ggagatgacgacctattcacttccagtaacttcatcttccaccaccactctgataagaag
gctcctttgcagcctccaataaggaaggcattagctgctttcagtggaagaaggaatccc
aacgacaatcattattcacattccaggcattaa
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