Fragaria vesca (woodland strawberry): 101295607
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Entry
101295607 CDS
T02666
Name
(RefSeq) E3 ubiquitin-protein ligase UPL6
KO
K10589
ubiquitin-protein ligase E3 C [EC:
2.3.2.26
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101295607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
fve04121
]
101295607
Enzymes [BR:
fve01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
101295607
Ubiquitin system [BR:
fve04121
]
Ubiquitin ligases (E3)
HECT type E3
101295607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
101295607
NCBI-ProteinID:
XP_004295041
LinkDB
All DBs
Position
LG3:complement(24676207..24687278)
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AA seq
1035 aa
AA seq
DB search
MFFSGDSSNRKRVDLGGRSTKERDRQKLLEQTRLERNRRLWLRQQNSAATKIQKCFRGRK
VARLEYSKVREQFYGTYGEHFQNADKSCFGPDSDFLRQLLFFFDARSVGDFTVLVETCRL
LQKFVRDTGDIVSLFAGMDYSSKQALVNYRVKKLTYLCIKAVHQNRNQMKDQLFASPKES
TVSTTLLLETVVLLTNHKLPWVCRTVNYLLERKAFTLFREIILTGRASIENHDSVGRVSS
LERTLAVVISHIGQEPCNCSNVGAHWSFSSQILTIPFLWRLLPHLKEVFSERGLSQHYIH
QMALCVHNHADVLPNDTSVELPSYACLLGNILESSGVALSQPDRSFELAVDLAAVATFLL
ESLPSIKSLNRRSKEDSMVGEDDMTEGDDAMEICLNNDLERQICEAIDSRFLLQFTNVLF
GGISAVSDPHKAPDDKEISAVGAACAFLHVTFNTLPLERIMTILAYRTELVPVLWNFMKR
CNENQKWSSLSEQLAYLLSGDAPGWLLPLAVFCPVYKHMLTIVDNEEFYEQEKPLSLKDI
RSLIIILRQALWQLLWVNPTASSNFSKSVTSTPANKKHPVEFIQQRVGIVASELLSQLQD
WNNRREFTSPSDFHADGVNDFFISQAVIENTRAHDILKQAPFLVPFTSRVKIFTSQLTAA
RQRHESHSVFTRNRFRIRRDRILEDAYNQMSALSEEDLRGPIRVTFVNEFGVEEAGIDGG
GIFKDFMENITRAAFDVQYGLFKETSDHLLYPNPGSGMIHDQHLQFFHFLGILLAKALFE
GILVDIPFATFFLSKLKQKYNYLNDLPSLDPELYRHLIFLKHFKGVISELELYFVIVNNE
YGEQTEEELLPGGKNLRVTNENVITFIHLVANHRLNYQIRQQSSHFLRGFQQLVQKDWID
MFNEHELQLLISGSLDSLDIDDLRRNTNYVGGYHSEHYVVDMFWEVLKSFSLENQKKFLK
FVTGCSRGPLLGFKYLEPLFCIQRAAGSATDEALDRLPTAATCMNLLKLPPYRSKEQLET
KLMYAISSEAGFDLS
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgttcttctccggcgattcgtcgaatcggaagcgggtggatttggggggacggagtacg
aaggagagggataggcagaagcttctggagcaaacgaggttggagcgcaaccggaggttg
tggttgcggcagcagaactccgccgctactaagattcagaaatgcttcagagggagaaag
gtagcaagacttgaatattctaaggtgcgggaacagttttatggaacatacggggaacac
ttccagaatgcagacaaatcgtgttttggtccagactcggactttctccgccagttgctt
tttttctttgatgctcgaagtgttggcgacttcaccgtccttgtggaaacatgccggtta
ctccaaaaatttgtcagagatacaggggatattgtgagcctatttgcaggcatggactat
tcatcgaagcaggctttggttaattacagagtaaaaaaacttacgtatctgtgtatcaag
gctgttcatcaaaatagaaatcaaatgaaggatcaactttttgcatctcccaaggagtcc
actgtgtcgacaactttattgttggaaacagtagtcttgttgaccaatcataagcttcca
tgggtctgtaggacagtaaactatcttcttgaaagaaaggcatttaccctgtttagagag
attattttaactggaagggcgagtatagagaatcatgattcggttggcagagtatcttca
ttggagcgcactcttgctgttgtaatttctcacattggtcaggagccatgtaactgctca
aatgttggtgcacactggagtttttcgtctcagattcttacaattcctttcttgtggcgg
ctgctcccgcacttaaaagaggttttctcagaacgtgggttgagccaacattatattcat
cagatggcactctgtgttcataatcatgctgatgtgctccccaatgatacatcagttgag
ttacccagttatgcctgccttttgggaaatatactagaatcttctggagttgctctatct
cagcctgaccgctcatttgaactggctgtagaccttgctgctgttgcaacattcttgttg
gaatcacttccttctataaaatcgctaaatagacgaagcaaagaagattccatggtgggt
gaggatgatatgactgagggagatgatgcaatggaaatatgtttgaataatgatttggaa
cgacagatttgtgaggccatagattcacgctttctcctgcaatttacaaatgttttgttc
ggaggaatttcagctgtcagtgatccacacaaagcaccggatgataaagagatctcagct
gttggtgcagcgtgtgcctttctacatgtcactttcaacaccttacctcttgagagaatc
atgaccatcctagcttatagaactgaacttgtccctgttctatggaactttatgaaacgg
tgcaatgagaaccagaaatggtcttcattgtctgagcaattggcatatttactgtcagga
gatgcacctggttggctattacctttggcagttttctgtcccgtgtacaagcacatgctt
acaatagtcgataatgaggagttctatgaacaggagaagcccctatcgttgaaggatatc
agatccctaattatcatactcagacaggctctgtggcagcttctctgggtgaaccctacg
gcttccagtaacttttcaaaatctgtcaccagcacccctgctaataagaagcaccctgtg
gagttcattcaacagagggttggcatcgtagcatctgaactcctatcccagttgcaagat
tggaacaacagacgagagtttacatcccccagtgactttcatgctgatggtgtcaatgat
ttcttcatttcgcaggccgtgattgaaaatacccgagcccatgacattttgaagcaagct
ccgttcctagtaccgttcacaagcagagttaaaatattcacttctcaattgacagcagct
agacaaagacacgagtctcattctgtgtttaccagaaaccggttcagaattcggcgggac
cgtatcttggaagatgcttataatcagatgagtgcattgtctgaagaagatcttcgagga
ccgattcgggtaacatttgtaaacgaatttggggttgaagaagctggaattgatggtggt
gggatttttaaagatttcatggagaacattactcgagcagcctttgatgtccagtatggt
ttatttaaggaaacatccgaccatcttctctaccctaatcctggttcaggaatgattcat
gatcagcatctccaatttttccactttctgggaattcttcttgcaaaggccttgtttgag
ggaattcttgttgatattccatttgcaacgttcttcctgagcaaattaaagcagaagtac
aactacttaaatgatttaccttcattagacccagaattgtatcgccaccttattttcttg
aagcatttcaaaggtgttatttcagaactagaactatattttgtgattgtaaataacgag
tatggggagcaaaccgaggaagagctgcttccaggggggaagaatcttcgtgtcactaat
gaaaatgtcattactttcattcatctcgttgccaatcaccgtttaaattatcagatacgt
caacaaagttctcatttcttaagggggtttcagcagcttgtacagaaagattggatcgat
atgtttaatgagcatgaacttcagcttctgatatcaggctcacttgacagcctggatatt
gatgatctacggagaaacaccaattatgttggtggctatcacagtgagcattacgtcgtc
gacatgttctgggaagttctcaaaagcttttcactggaaaatcagaagaaatttttgaaa
tttgtgactgggtgctctcgaggaccattgcttggattcaagtaccttgaaccactgttt
tgcatccagagagctgctggtagtgcaactgatgaagctcttgaccgattgccaactgcg
gctacatgtatgaatcttctgaagcttccaccataccggagcaaagagcaattagaaacg
aagttgatgtacgcaataagttcagaagccggttttgatctgagctga
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