Fragaria vesca (woodland strawberry): 101296073
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Entry
101296073 CDS
T02666
Name
(RefSeq) THO complex subunit 4A
KO
K12881
THO complex subunit 4
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03013
Nucleocytoplasmic transport
fve03015
mRNA surveillance pathway
fve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101296073
09122 Translation
03013 Nucleocytoplasmic transport
101296073
03015 mRNA surveillance pathway
101296073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101296073
03041 Spliceosome [BR:
fve03041
]
101296073
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101296073
TREX complex
101296073
Spliceosome [BR:
fve03041
]
Complex C
Other components
EJC/TREX
101296073
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101296073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
101296073
NCBI-ProteinID:
XP_011461250
LinkDB
All DBs
Position
LG3:complement(17929220..17932826)
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AA seq
250 aa
AA seq
DB search
MDHLNMSLDDIIKTSKKPGSGNNRGGRGRAASGPGPARRLPNRAGNRATPYGGAKAPEST
WQHDMFADQGAAYSAAPAGRASAIETGTKLYISNLDYGVSNEDIKELFVEVGDLKRYGVH
YDRSGRSKGTADVVFSRRQDAVAAVKRYNNVMLDGKPMKIEIVGTNISTPGAPLALPPAA
NGAFRNSNGAPRGGQGRGGAFNRPRGGAGRGPRRGRGGRGRGGRTGEKVSAEDLDAELEK
YHATAETMQE
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggatcatctaaacatgtccctcgacgacatcatcaagacctccaagaaacccggatcc
ggcaacaaccgcggcggccgcggccgggctgcctcaggtcccggacccgcccgccgcttg
cccaatcgcgccggaaatcgtgcgacgccgtacggcggcgccaaggcgccggagtccacg
tggcagcacgacatgttcgcggatcagggagcggcttacagtgcagctccggctggcaga
gcctccgccatcgaaactggaaccaagctctacatctctaatctcgactatggcgtctcc
aacgaggacatcaaggagctgtttgttgaggttggtgacctgaaacgctatggggtgcat
tacgacagaagtggcagatccaagggaaccgcagatgtagtcttctcacgaagacaggat
gctgtggctgctgttaaaagatacaacaatgtgatgcttgacgggaaaccgatgaagata
gagattgtaggaacaaacatctcaacacctggtgcgcctctcgctctgcctccagctgca
aatggtgctttcagaaattcaaatggagctccccggggtggacagggtagaggtggtgct
ttcaaccgccctcgtggtggggctggccgtggtcctagacggggccgtggtggacgtgga
agaggagggcgtactggtgaaaaggtttctgctgaagaccttgatgctgagctggagaag
taccatgcaactgcagaaacaatgcaagagtag
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integrated database retrieval system