Fragaria vesca (woodland strawberry): 101296139
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Entry
101296139 CDS
T02666
Name
(RefSeq) polygalacturonase At1g48100
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00040
Pentose and glucuronate interconversions
fve01100
Metabolic pathways
Module
fve_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101296139
Enzymes [BR:
fve01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
101296139
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
101296139
NCBI-ProteinID:
XP_011468272
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Position
LG6:complement(37175601..37178705)
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AA seq
316 aa
AA seq
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MRTFKLSSLAWIMLIAFSIWSSSLLETCEARKGKHHQWRKHRGTKRGNGGRCPHHHHPSG
HSVSVLRSDNYITEEDTEVSAAQKSGAVYNVLDYGAKGDGKADDTKAFVAAWAAACKVQA
STVTVPSGSVFLVKPISFSGPNCQPHIVFQLDGKIIAPTGAGAWGSGLLQWLEFTKLQRL
TIRGKGVIDGQGAVWWNDSPTYNPTDETADNSTEDSQTVDSYNGKMPSTKPTALRFYGSN
GVTVTGITIQNSPQAHLKFDSCTNVQVSAVTISSPGDSPNTDGIHLQNSQDVAISGASLA
CGNFQHSSIKSRGNLA
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgagaactttcaaactaagcagcctggcatggattatgctcattgccttttctatttgg
tcttcgagcttgttggagacttgtgaagctagaaaaggcaagcatcatcaatggaggaaa
caccgagggacgaaaaggggtaacgggggtcggtgtccgcatcatcatcacccttcaggc
cactctgtgtctgttttgagaagtgacaattacatcacagaggaagatactgaagtgagt
gcagcgcagaagagtggtgccgtctacaatgtattggactatggtgctaaaggtgatgga
aaggcagatgacactaaggcgttcgtagcagcgtgggcagcggcgtgcaaagtgcaagca
tcaactgtaaccgttccatctgggtctgtattccttgtcaaacctatctccttttccggc
cctaattgtcaaccacacattgtatttcagctagacggaaaaatcatagcaccgacaggt
gcgggagcttggggttcaggcctcctacaatggcttgagttcacaaagcttcaaagactt
acaatcagaggtaaaggagtgattgatggacaaggtgcagtgtggtggaatgactctccc
acatacaatcctacagatgaaacagcagacaacagtacagaagattcgcagaccgtagac
agttacaatggaaaaatgccaagcacaaaaccaacagcgcttaggttctatggaagcaat
ggtgtgacagtcactggcataacaattcaaaacagccctcaagctcacctcaagtttgac
tcctgcacaaatgtacaagtgtctgccgtaacgatttcatcccccggcgacagccccaac
accgatggaatccaccttcagaactcccaggacgtggccatttctggcgcaagccttgct
tgtggtaattttcaacattcaagtatcaagagtaggggaaatcttgcctag
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