KEGG   Fragaria vesca (woodland strawberry): 101296237
Entry
101296237         CDS       T02666                                 
Name
(RefSeq) polygalacturonase
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve00040  Pentose and glucuronate interconversions
fve01100  Metabolic pathways
Module
fve_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:fve00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    101296237
Enzymes [BR:fve01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     101296237
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim NosD Pectate_lyase_4 Beta_helix_3
Other DBs
NCBI-GeneID: 101296237
NCBI-ProteinID: XP_004288735
LinkDB
Position
LG1:1197999..1199671
AA seq 402 aa
MAPKLVSAMSVVIACLVALAFLFESSHAAGGATYNVVSYGARGDGKTDSTKAFLRAWSAA
CFSSRSATVYVPRGTFLLKPVVFSGPCRSSRIVFQMGAGTSTTLVAPSNYWELGNTGNWI
LFIKVTGLSIYGGTVDARGAGYWHCKRYGKSCTAGARSVSLFWCSNVVVSGLRTLNSQTM
HMAIDHSNNVHVKNVWIRAPSGSPNTDGIHIEASTGITITASTIMTGDDCISLGSGARNV
WIERIACGPGHGISIGSLGGSVNEDGVQNVTVTSSVFTKTQNGVRIKSWARASNGFARNI
VYRNLIMKNVDNPIIIDQKYCPGNKGCPRQSSGVKISKVTYKNIRGSSGTQVAMNFYCSP
SNPCWGIKLQDIRLTYGKKAATSSCANIGGSKSGVIIPRSCF
NT seq 1209 nt   +upstreamnt  +downstreamnt
atggcacctaagcttgtatctgctatgtctgttgttatagcttgtttggtagccttggcg
ttcttgtttgaatcatcacatgcagctggcggtgcaacctacaatgtggtgagctacggt
gcgagaggagatgggaaaacagactcaaccaaagcattcctcagggcatggtccgcggca
tgcttctcttctagaagcgccaccgtttacgttcctcgtggcaccttcttgttgaaacct
gtagttttcagcggcccatgcagaagtagcagaattgtgtttcagatgggagcgggaacc
agtactactctagttgccccttcgaattactgggaactcggaaacaccggaaattggatt
ttgttcataaaggtaacaggcctctctatctacggaggtacagttgatgctcgtggtgct
ggatattggcattgcaagagatatggcaagagttgcacagcaggagccaggtcagtatcg
ttgttttggtgtagtaatgtggtggtgagcgggttgaggaccttgaacagccagactatg
catatggcaattgaccacagcaacaatgtacatgttaaaaacgtgtggatcagagcccca
agcggtagtcctaacacagacggcatacacattgaagcttcgactgggattaccattact
gccagcaccataatgaccggagatgactgcatatcacttggctccggcgcaagaaacgtg
tggattgaacgcatagcctgtggccctggacatggaataagcattggtagtcttggtggt
tctgtgaatgaagatggtgtgcagaacgtgacagtaacaagttccgtcttcacaaaaacg
caaaacggcgtacggatcaaatcatgggcgagagcaagcaatggttttgcaagaaacatt
gtttaccgcaaccttatcatgaaaaatgtcgacaaccccatcatcatcgatcagaaatac
tgccctggtaacaaaggttgtcctcgtcagagctctggcgtgaagattagcaaagtgaca
tacaagaacataaggggctcatcaggcacacaagtagccatgaacttctactgcagcccc
agtaatccgtgctggggaatcaagctgcaagatataaggctcacttatgggaaaaaggcg
gccacttcctcttgtgccaatatcggtgggagcaagagtggagtgatcataccaaggagt
tgtttttga

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