Fragaria vesca (woodland strawberry): 101296301
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Entry
101296301 CDS
T02666
Name
(RefSeq) protein CHROMATIN REMODELING 20
KO
K10779
transcriptional regulator ATRX
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fve03000
]
101296301
03036 Chromosome and associated proteins [BR:
fve03036
]
101296301
Transcription factors [BR:
fve03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
101296301
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
101296301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CTD2
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
101296301
NCBI-ProteinID:
XP_011466019
LinkDB
All DBs
Position
LG6:1239819..1252135
Genome browser
AA seq
1459 aa
AA seq
DB search
MEENHDVVEDVDSGSGGSDLDSFIDDFDSEVDEVSISGQDDGLHLKEPLSDKEIGELIAE
FLEVESKAAEAQEALEKESLAKVETEVREELAQTLQGNDLETAVADEMATLIEDWKTELD
ELETESAHLLEQLDGAGIELPSLYKWIESQAPNGCCTEAWKTRIHWVGSQVSGEFTESRA
DAEKYLQTHRPVRRKHGKLLEDGASGFLQKKLAEDGSKDVVTTEVDWCSVNKFFSDGATK
DSTSFGSKHWASVYLASTPHQAAEMGLEFPGVNEVEEIDDIDGNSSDPFVAAAVANEREL
NLSEEQKGNYRKVKEEDDANIDRKLQVHLKRRRHQKRSKQDVSRKIDEDGVNICNKDNEV
EDQTLKSAMLEGLEISNGIDNQRIMSNGAPLSPDSTEARGSKRPNESDELNIDNKRSRTI
ILDSDDEAAMEDTFDCNMINSEDPSYVKENICISGDDGLTSHSLNKKLQCTACNKLSADI
SSHPLMRVIICANCKRLLEEKMHLKDPDCSVCYCGWCGQSNDLLSCKSCTMLFCTNCIKR
NIGEECLSKAQTNGWQCCSCCPSLIQTLTVQLQEAMGYEDLIVSSSDSDSDDSEAGMDVA
NSSKRMRKKKIRRIIDDAELGEETKKKVAIEKERRERLQSFEVQLSVKSKMKVCSSYNWN
ISEGASAEVVGDASAGYIVNVMREKGEEPVRIPPSLSSKLKAHQIMGVRFMWENIVQSVR
EVKSGDEGLGCILAHMMGLGKTLQVITFLYTAMRSIDLGLKTALIVTPVNVLHNWRQEFL
KWKPSEVKPLRVFMLEDVSREKRLELLVKWRTKGGVFLIGYTAFRNLSFKKHVKDQQMAE
EICHALHDGPDILVCDEAHIIKNTNAEVTQALKKVRCQRRIALTGSPLQNNLMEYYCMVD
FVREGFLGSSHEFRNRFQNPIENGQHTNSTVRDVKIMKERSYVLSETLKGFVQRMGLSVV
KKDLPPKTVFVITVRLSPIQKKLYKRFLDVHGFTADRIYNEKMKRGFFAGYQALAQIWNH
PGILQLRKDDRVYMRHEDGVENLNANDSSSDENTDYIGEKQGNINATLPGKKDDGYFQKD
WWNDLIHENNYKEVDYSGKMVLLLDILAMCSDVGDKALVFSQSIPTLDLIELYLARLPRH
GKRCKFWKKGKDWFRLDGRTESSERQRLVERFNDPLNKRVKCTLISTKAGSLGINLYAAN
RVIIVDGSWNPTYDLQAIYRAWRYGQTKPVFAYRLMAHRTMEEKIYKRQVTKEGLAARVV
DRQQVHRTISKEEMLHLFEFGDDENHEGPEHDNRANQSIAGSHDNLPKHETHLSYGNCAD
KLMEKLLGKHYPSWIANFHLHETLLQENEEEKLSKEEQAMALEAYRRSFEWEEVQQVPLN
EAVVDQKPASPIVNTPATEVSSSAESKARGTFVQRKCTKISHLLTLRSQGTKSGCTTVCG
ECAREISWEGLNQEGKNAK
NT seq
4380 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaatcatgatgtggtggaagatgtggatagcggttctggtggtagtgatttg
gattcttttatagatgattttgattcggaagttgatgaagtatcgatatcaggacaagat
gacggattgcatctcaaggaacctttatctgataaagaaattggggagctgattgctgaa
tttttggaggttgagagtaaggctgcagaggctcaggaagcgcttgaaaaggagtctctt
gccaaagtggagactgaagttagagaggagctggcacaaactcttcaagggaatgatttg
gaaacagctgttgcagatgaaatggctactttaatagaagactggaaaacagagctcgat
gagcttgagactgagagtgctcatttgttggaacaacttgatggggcaggcattgagcta
ccaagcctttataagtggattgaaagtcaggctcctaatggttgctgcactgaagcttgg
aaaacacgaatacactgggtaggaagtcaggtgagtggagaattcactgagtcaagagct
gatgctgagaagtatctccaaactcacagacctgtaagaaggaaacatgggaagttattg
gaggatggtgctagtgggtttctgcagaaaaaactagctgaagacgggagcaaggatgtt
gtgacaacggaggttgattggtgttctgtcaacaaattcttttctgacggtgcaactaag
gatagcacctcatttggcagcaagcactgggcttctgtttacttggctagcacacctcac
caagctgctgagatgggacttgaattccctggagtcaatgaggtggaggagattgatgac
atagatggcaattctagtgatccatttgttgcagctgcagttgcaaatgaaagagaactg
aatctctctgaagaacaaaaaggaaattataggaaggttaaggaagaagatgatgcgaac
attgataggaagcttcaagttcatttgaaacggaggagacatcaaaagagatctaaacag
gatgtcagtaggaaaattgatgaagatggcgttaatatttgtaacaaagataatgaggtt
gaagaccaaactttgaagtctgccatgcttgaaggtttggaaatttctaatggtattgac
aatcaaaggatcatgagtaatggtgctccgctgtctcctgattccactgaagccagaggg
tccaaacggccgaatgagagcgacgaactgaacattgataataagaggagtcgaactata
attttagacagtgatgatgaagctgcaatggaagatactttcgactgcaatatgattaac
tctgaggatccttcctatgtcaaagagaatatatgcatttctggagatgatggtctcaca
tcacatagtctgaataagaaactccaatgcacagcttgtaataaactttctgctgatata
agttcacatccacttatgagagtgattatatgtgcaaattgcaagcgcttattggaagaa
aagatgcatttgaaggatcctgattgctccgtgtgttattgtgggtggtgtgggcaaagc
aatgatttattgagttgtaaatcttgcacaatgctattctgtacaaattgtataaagagg
aatatcggagaggaatgcttatccaaggcccagaccaatggctggcagtgttgttcctgt
tgcccgagtctcatacagacattgacggtacaacttcaggaagcaatgggatatgaagat
ttgatagtatctagctccgatagtgattcagatgattcagaagcaggcatggatgttgct
aacagttctaagaggatgagaaagaagaagatacgaaggattattgatgatgccgaattg
ggagaagaaaccaaaaaaaaagttgcgattgaaaaggaacgtcgagagcgtttgcagtcc
tttgaagtgcaactttctgttaaatctaagatgaaggtctgttctagctataattggaat
atatctgaaggtgctagtgctgaagttgtgggtgatgcatcagctggttatattgtgaat
gttatgagagagaaaggtgaagaacctgtgagaattcctccaagcctttcatcaaaattg
aaggctcatcagattatgggcgtaaggtttatgtgggagaacatcgtacagtctgtcaga
gaagtgaagtctggggatgaagggcttggttgtattcttgctcacatgatgggccttggt
aaaacgcttcaggttattacttttctgtatactgcaatgagaagtattgatttggggtta
aaaactgcacttattgtcactcctgttaatgtgcttcataattggcggcaagagttcttg
aagtggaaaccatcagaagtaaagcctcttcgggtcttcatgctagaagatgtttcaagg
gagaagagattagagttgcttgtaaagtggagaactaagggtggtgttttcttgattggc
tacactgctttcagaaatttatcttttaaaaagcatgtaaaggatcagcagatggctgaa
gaaatttgtcatgccttacatgatggacctgatatactagtttgtgacgaggcccatatt
attaagaataccaacgctgaagtaacccaggccctgaaaaaagttagatgccaaagaagg
atagcattaactgggtcacctcttcagaacaatctcatggaatattattgtatggttgat
tttgtaagggaaggttttcttggaagtagccacgagtttagaaaccgcttccagaatcct
atagagaatggtcaacatactaattcaactgtgagagatgtgaaaatcatgaaagagaga
tcgtatgttctgtctgaaacgttgaaaggatttgttcaaagaatgggcctgagcgtggtg
aagaaggacttaccacctaaaactgtttttgtgataactgtgaggctttctcccatacag
aagaaattatacaagagattccttgatgtgcatggattcactgctgacaggatttataat
gaaaagatgaaaagaggttttttcgctggctaccaggccttagctcagatatggaaccat
cctgggatattgcaattgagaaaagatgacagagtctatatgaggcatgaagatggtgtg
gagaatttaaatgctaatgacagctctagtgatgaaaacactgactatataggagagaag
caggggaatatcaatgcaactttgccaggaaaaaaagatgatggttactttcagaaggat
tggtggaatgatctcatccatgaaaataattataaggaggttgattacagtggcaaaatg
gtattgctgcttgacattctagccatgtgttctgatgtgggtgataaggcattggtattt
agtcagagcataccaactcttgatttgatagaactttaccttgcaagattacctcggcat
gggaagagatgcaagttttggaagaaaggaaaagattggtttaggctagatggaagaaca
gagagctcggaaaggcaaagattggttgagcgctttaatgatcctttaaacaagagggtg
aaatgcactctaatatctaccaaagctggatccttggggataaatctttatgcagctaac
cgtgtaatcatagttgatgggtcttggaatccgacgtatgatcttcaggctatctatcgt
gcttggaggtatggccaaacaaagcccgtgtttgcttacagattgatggcacatagaact
atggaagaaaaaatttataagcgtcaggtaacaaaggagggcctggctgcaagggtagtc
gacagacaacaggtacataggacaatatccaaagaagagatgttacatctttttgagttt
ggtgacgatgaaaaccatgaagggcctgagcacgataacagagctaatcaaagtattgct
ggttcacatgataatttgcctaagcacgaaacacatctttcttacggaaattgcgctgac
aaattgatggaaaagttacttggcaagcattatccgagttggattgccaattttcactta
catgagacgctattgcaagagaatgaagaggaaaagctatcaaaagaggagcaagccatg
gctttggaagcataccggagatcatttgaatgggaggaagtgcagcaggttcctctcaat
gaagctgtagttgaccaaaagccagcttcgccaatagtgaacacacctgcaacagaggtg
agcagctctgcagaatctaaggcaaggggtacttttgtgcagcggaaatgcacaaaaatt
tcgcatttactgacccttagaagtcaaggtacaaaatctggttgcaccactgtgtgtggg
gaatgtgctcgtgagataagctgggagggtttgaatcaagaaggcaagaatgcaaaataa
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integrated database retrieval system
