Fragaria vesca (woodland strawberry): 101296405
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Entry
101296405 CDS
T02666
Name
(RefSeq) transcription initiation factor TFIID subunit 12b
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101296405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fve03021
]
101296405
03036 Chromosome and associated proteins [BR:
fve03036
]
101296405
Transcription machinery [BR:
fve03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101296405
Coactivators
SAGA/TFTC/STAGA complex
101296405
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
101296405
STAGA complex
101296405
TFTC complex
101296405
SAGA complex
101296405
SLIK complex
101296405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
101296405
NCBI-ProteinID:
XP_011467427
LinkDB
All DBs
Position
LG6:24331615..24336997
Genome browser
AA seq
624 aa
AA seq
DB search
MAENVSSPSQKPLQPPNPNSIEASTAAASPNIIITQNQNPSNSAASNPAIPSPQISSPPL
PPLPSISLPQNQQLLSPTVGLDYTQKPNPQSQPLVQQQNVMSNFQLQQSMQRSPSMSRLN
QIQQQNQSQQQQHFGMMRQQQANLYGQQVSFGGSGGIQQSNQQQQQNQTQQQQQIGGGSL
SRAALLSQSGQLPMLSGAAATAAQFNMQPQLLASPRQKSGLVQGTQFNSPGQSLQGTQAM
GMGMMGSINLTSQLRANGALAYAQQRLNQGGQLRQQLSQQSSLASPQNLPRTSSLAFMNP
QLSGLAQNGQPAMMQNSLSQQWLKQMPAISGPGSPSYRLQQQRQQAIFQQQLASSTQLHQ
KSLSMNQQQLSQIVQQQQQQQQLGLPQLQHQQQQQHQQQIQQPLQQQSQQQQPFNQQQQQ
PQQNSPRMPVPAGQKSLSLTGSQPDATASGTTTPGGSSSQGTEATNQLLGKRKMQDLVSQ
VDSQGRLDSEVEDLLLEIADDFIDSVTTFACSLAKHRKSSTLESKDVLLHLEKNWHLTIP
GFSSEERKYQNKSLSSDVHKKRLDMIRMLMESSQPETNTNNPKEVIRGYGNPVGANHLIR
PSLGGEQLVSQATGSQMLQQMTRF
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaatgtctcatctccatcccaaaaacccctgcaacctccaaaccccaatagc
attgaagcctcaacagcagcagcctccccaaacattataatcacccaaaaccaaaaccca
tcaaactcagcagcctcaaacccagcaatcccatctccccaaatctcatccccgcccctc
cctcctctcccctccatctccctcccacaaaaccaacagctcctctcccccaccgtcgga
ttggactacacccagaaacccaatccccaatcacagccgttggttcagcaacagaatgta
atgtcgaatttccagctgcagcagagcatgcagcgatcgccgtccatgtcgcggctgaac
cagattcagcagcagaaccagagccagcagcagcagcatttcggtatgatgaggcagcag
caggccaacttgtatggccagcaggtcagtttcggaggctccggcggaattcagcagtcc
aatcagcagcaacagcagaaccagacgcagcagcagcagcaaattggcgggggcagcttg
tcccgagctgccctgctcagccagagcggccaactgccaatgctgtctggtgctgctgcc
acggctgcgcagttcaatatgcagccgcagttgttggcttcgccacgacaaaaaagcggg
ttagtccaaggtacgcaatttaattctcctggacaatctctacaaggaacacaagccatg
ggtatggggatgatgggatccatcaatttgacctcacagctaagagctaatggagcccta
gcttatgctcaacaacgactgaaccagggcggccaacttagacaacaattgtcccagcaa
agttcactcgcctctccgcagaacttgccaagaacatcctcacttgcatttatgaaccct
cagctatctgggctggctcagaacggacagccagctatgatgcagaattctttatcacaa
cagtggttgaagcaaatgccagcaatttcaggccctggctcaccttcataccgccttcag
caacagagacagcaggctatcttccagcagcaactggcttcatccactcagttgcatcaa
aagtccttgtcgatgaaccagcaacagttatcccagattgtacagcaacagcagcagcaa
caacagttggggcttccacagctgcagcatcaacaacagcagcaacatcaacagcaaata
cagcagccactacaacaacaatcacagcaacaacagcctttcaatcagcagcagcagcag
ccgcagcagaattccccaaggatgcctgtaccggcaggccagaaatctcttagtttaaca
ggatcacagcctgatgctactgcatctggtacaactacaccaggagggagttcaagccaa
gggacagaagcaaccaaccaacttcttgggaagagaaaaatgcaagatttagtctcacag
gttgattcacagggaaggttggattctgaagttgaagatcttcttttggagattgcagat
gacttcattgattcggtgactacatttgcatgtagtttggcaaagcatagaaaatcttca
actttagagtccaaggatgtgttgctacacttagagaaaaattggcatttgacaattccc
ggattttcaagtgaagagaggaagtaccaaaacaaatctttgtcaagtgatgtacataag
aaacgtttagatatgatacggatgctgatggaatcatcacaaccagaaacaaatactaat
aatcctaaggaggtgatcagagggtatggtaaccctgttggtgccaaccacttgataaga
ccttcccttggtggagaacagttggtttcccaagcaactggttctcagatgctgcagcag
atgacacggttttag
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integrated database retrieval system
