Fragaria vesca (woodland strawberry): 101296454
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Entry
101296454 CDS
T02666
Name
(RefSeq) ABC transporter F family member 1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fve03009
]
101296454
Ribosome biogenesis [BR:
fve03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
101296454
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_23
AAA_14
MMR_HSR1
RsgA_GTPase
AAA_28
AAA_22
AAA_16
AAA_15
AAA_30
Motif
Other DBs
NCBI-GeneID:
101296454
NCBI-ProteinID:
XP_004291637
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Position
LG2:complement(28082640..28086850)
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AA seq
597 aa
AA seq
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MVSDASKKKAAQKKAAAAAKRGGKAAAAASSKSASESQNGADKLANGVESMRISDRNCTG
VLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRE
LPIPEHMDIFHLSREIEASDMSSLEAVISCDEERIRLEKEVEELAAQDDGGGEQLERIYE
RLEALDAATAEKRAAEILYGLGFDKQMQAKKTRDFSGGWRMRIALARALFINPTILLLDE
PTNHLDLEACVWLEETLKKFERILVVVSHSQDFLNGVCTNIIHMQSKKLKIYSGNYDQYV
QTRSELEENQMKQYKWEQEQISNMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEK
VARDKILVFRFVDVGKLPPPVLQFVEVSFGYTPDNLIYKNIDFGVDLDSRVALVGPNGAG
KSTLLKLMTGELTPLDGMVRRHNHLRIAQFHQHLTEKLDMELSALQFMIKEYPGNEEEKM
RASIGKFGLTGKAQVMPMSNLSDGQRSRVIFAWLAFRQPQMLLLDEPTNHLDIETIDSLA
EALNEWDGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMQFKNHLKSKAGLGD
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggtctccgacgcaagcaagaagaaggcggctcagaagaaggcggcggcggcggccaag
agaggtggaaaggcagcggcggcggcttcgtcaaaatctgcgtccgagtcgcagaatgga
gctgataagctcgccaatggagtcgaatcgatgaggatatcggatcggaattgcactggc
gtgctttgctctcaccctctttccagggatatccggattgagtctctatcagttactttc
catgggcatgatttgatagttgattctgaactggagcttaattatggcagacgttatggt
ttacttgggttgaatgggtgtggtaaatctaccttgctgactgcaatagggtgccgagag
cttcctatcccagaacacatggatatctttcatctcagcagggaaattgaagcttcagac
atgtcttcactagaggctgtcattagctgtgatgaggagaggattagattggagaaagaa
gttgaagaattggcagctcaagatgatggaggtggagagcagcttgaacgcatttatgag
cgtcttgaagctctggatgcagcaactgcagagaagcgtgccgctgaaatactctatggt
ctcggttttgacaaacagatgcaagcaaagaaaactagagatttctctggtggttggagg
atgaggattgcacttgcacgtgctctatttatcaacccaacaatcctgttgcttgatgag
cctactaatcatcttgatctcgaagcttgtgtgtggttagaggagactctgaagaaattt
gaacgcatcttggttgtggtttcacattctcaggatttcctgaatggtgtttgcacaaat
atcattcacatgcagagcaagaaactgaagatctactctggaaactatgatcaatatgtt
cagacacgttcagaacttgaagaaaaccagatgaaacagtacaagtgggagcaagaacaa
atttctaacatgaaagagtacattgctcgttttggtcacgggtcagcgaaactagctcgc
caggcacaaagtaaagagaagacgctagctaaaatggagcgtggtgggcttactgaaaag
gtggccagagacaagattttagtctttcgctttgttgatgtgggaaagctgccaccacct
gtgcttcagtttgttgaagtctcatttggttacactcctgataatctgatctacaagaac
atcgactttggtgttgatttggattcgcgtgtcgctctggttggccccaatggagctgga
aagagtactctcctgaagctgatgacgggggaattgactcctcttgatggcatggtccgg
aggcacaatcaccttaggattgctcaattccatcagcacttgactgagaagcttgacatg
gagctgtctgccctccagtttatgatcaaagagtacccaggaaacgaggaagagaagatg
agggcttcaattggtaaatttggactaacaggcaaagcacaagtgatgccaatgagtaat
ttgtcagatgggcagaggagccgtgttatctttgcttggttggcgtttaggcaacctcag
atgcttctgttggatgagccaactaatcatttggatattgagacaattgactcactggcc
gaggcgttgaatgagtgggatgggggtctggttcttgttagccacgatttcagactcata
aaccaagtagctcatgagatttgggtatgtgaaaatcaagctgtgacccggtgggagggt
gatattatgcaatttaaaaatcacctcaagtcaaaggctggtttaggtgattaa
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