KEGG   Fragaria vesca (woodland strawberry): 101296496
Entry
101296496         CDS       T02666                                 
Name
(RefSeq) pre-mRNA-splicing factor 38
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101296496
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:fve03041]
    101296496
Spliceosome [BR:fve03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    101296496
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    101296496
SSDB
Motif
Pfam: PRP38 PRP38_assoc HIND
Other DBs
NCBI-GeneID: 101296496
NCBI-ProteinID: XP_004302263
LinkDB
Position
LG6:complement(3262656..3265945)
AA seq 386 aa
MANRTDPSAKNIRGTNPQNLIEKIVRTKIYNNTYWKEQCFGLTAETLVDKAMELDHIGGT
FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNDDYKYVRVLGAFYLRITGSDTDVYQYL
EPLYNDYRKLRSKLADGRFSLTHVDELIDDLLTKDYSCDIAMPRIKKRWTLESLGLLEPR
KSALEEDFEEEEEEKEENDQLNGMDDEGHDKEYYRGRSPERERDRDRRRDRDRYRDRDYD
REYDRDRDYDRERGRGRERDRNRERDRDRDRYRLRDEKDYGRDRDREWDGRERERRDRDR
GRRRSHSRSRSRSREHKDRDGGDHRKRHARSISPRRRDGPDDGTREEPRKKKEKKEKKAD
GTDHPDPEIAEANRLRASLGLKPLNV
NT seq 1161 nt   +upstreamnt  +downstreamnt
atggcgaaccgcacggatccgtcggcgaagaacataaggggcacgaacccccagaacctg
atcgagaagatcgtacggaccaagatatacaacaacacctattggaaggagcagtgcttc
ggattgacggcggagacgcttgtggacaaggccatggagctcgaccacatcggcgggacc
ttcggcggtaaccggaagccgacgccgttcatgtgccttgtgatgaagatgctccagatc
caaccggagaaggaaatcgtcatcgagtttattaagaacgacgactacaaatatgtccgg
gtgcttggtgcattttacttgcggattacaggcagcgatactgatgtttaccagtacctt
gagcctttgtacaatgactatcggaagttgaggagtaaattggctgacggacgtttctca
ttgactcatgtggatgagcttattgatgatcttttgacaaaagactactcatgtgacatt
gccatgccaagaattaagaaaaggtggactctcgaatcacttggtttgttggaacctaga
aaaagtgctttggaggaggactttgaggaggaggaggaagagaaagaggagaacgatcag
cttaatggaatggatgatgaaggccatgataaggagtattaccgtggccgaagtcctgaa
agggaaagagacagggatagaagacgtgacagggaccgatacagggatcgtgattatgac
agagaatatgacagggatagagactatgacagagaacgtggacgtgggagagaaagagat
aggaacagggagagggaccgggaccgggacagatatagactgagagatgaaaaggattat
ggccgtgacagggatcgggagtgggatggtagggagcgtgagaggcgagacagggatcgt
ggcaggaggaggagccattcgaggagccgaagtaggagtagggagcacaaggatcgtgat
ggtggggatcaccgcaagagacatgcccgcagcatcagtcctaggaggcgcgatgggcct
gatgatggcactcgtgaggagccaaggaagaagaaagagaagaaggagaagaaggctgat
ggcacagaccatcctgatcctgagattgctgaagccaacaggctccgagcatctcttggt
ttgaagccccttaatgtctga

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