Fragaria vesca (woodland strawberry): 101296496
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Entry
101296496 CDS
T02666
Name
(RefSeq) pre-mRNA-splicing factor 38
KO
K12849
pre-mRNA-splicing factor 38A
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101296496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fve03041
]
101296496
Spliceosome [BR:
fve03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
101296496
Complex C
U4/U6.U5 tri-SnRNP related factors
101296496
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Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
101296496
NCBI-ProteinID:
XP_004302263
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Position
LG6:complement(3262656..3265945)
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AA seq
386 aa
AA seq
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MANRTDPSAKNIRGTNPQNLIEKIVRTKIYNNTYWKEQCFGLTAETLVDKAMELDHIGGT
FGGNRKPTPFMCLVMKMLQIQPEKEIVIEFIKNDDYKYVRVLGAFYLRITGSDTDVYQYL
EPLYNDYRKLRSKLADGRFSLTHVDELIDDLLTKDYSCDIAMPRIKKRWTLESLGLLEPR
KSALEEDFEEEEEEKEENDQLNGMDDEGHDKEYYRGRSPERERDRDRRRDRDRYRDRDYD
REYDRDRDYDRERGRGRERDRNRERDRDRDRYRLRDEKDYGRDRDREWDGRERERRDRDR
GRRRSHSRSRSRSREHKDRDGGDHRKRHARSISPRRRDGPDDGTREEPRKKKEKKEKKAD
GTDHPDPEIAEANRLRASLGLKPLNV
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgcacggatccgtcggcgaagaacataaggggcacgaacccccagaacctg
atcgagaagatcgtacggaccaagatatacaacaacacctattggaaggagcagtgcttc
ggattgacggcggagacgcttgtggacaaggccatggagctcgaccacatcggcgggacc
ttcggcggtaaccggaagccgacgccgttcatgtgccttgtgatgaagatgctccagatc
caaccggagaaggaaatcgtcatcgagtttattaagaacgacgactacaaatatgtccgg
gtgcttggtgcattttacttgcggattacaggcagcgatactgatgtttaccagtacctt
gagcctttgtacaatgactatcggaagttgaggagtaaattggctgacggacgtttctca
ttgactcatgtggatgagcttattgatgatcttttgacaaaagactactcatgtgacatt
gccatgccaagaattaagaaaaggtggactctcgaatcacttggtttgttggaacctaga
aaaagtgctttggaggaggactttgaggaggaggaggaagagaaagaggagaacgatcag
cttaatggaatggatgatgaaggccatgataaggagtattaccgtggccgaagtcctgaa
agggaaagagacagggatagaagacgtgacagggaccgatacagggatcgtgattatgac
agagaatatgacagggatagagactatgacagagaacgtggacgtgggagagaaagagat
aggaacagggagagggaccgggaccgggacagatatagactgagagatgaaaaggattat
ggccgtgacagggatcgggagtgggatggtagggagcgtgagaggcgagacagggatcgt
ggcaggaggaggagccattcgaggagccgaagtaggagtagggagcacaaggatcgtgat
ggtggggatcaccgcaagagacatgcccgcagcatcagtcctaggaggcgcgatgggcct
gatgatggcactcgtgaggagccaaggaagaagaaagagaagaaggagaagaaggctgat
ggcacagaccatcctgatcctgagattgctgaagccaacaggctccgagcatctcttggt
ttgaagccccttaatgtctga
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