Fragaria vesca (woodland strawberry): 101296519
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Entry
101296519 CDS
T02666
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00040
Pentose and glucuronate interconversions
fve01100
Metabolic pathways
Module
fve_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101296519
Enzymes [BR:
fve01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
101296519
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
101296519
NCBI-ProteinID:
XP_004288736
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Position
LG1:1201246..1202790
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AA seq
376 aa
AA seq
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MFGLSDAAATYNVMKYGAKADGKSDSTQAFVKTWAAACSSNQTATMYVPKGRFLLKAAVF
RGPCKSRIKVQIYGSLIAPTDYWALGNSGYWILFIKVNRLAVFGGTLDGKGAGFWACRKA
GKSCPVGARSITFNWANDVVISGLVSINSQQTHLVINSCNNVVVRNVKLVAPADSPNTDG
IHVQSSTGVTITGATLQTGDDCVSIGAGTKNLYMSNIKCGPGHGVSIGSLGKEANEAGVQ
NVTLTNAVFSGSDNGVRIKTWARPSNGFVTNVLFRNIMMRNVENPIIIDQNYCPNNNGCP
NQTSGVKISQVTYKNIQGTSATAEAVTFDCSPSNPCRGIRLEDIKLTYMNQLATSSCKNI
DGTSTGVLMPQSCVAS
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgttcgggttatcggatgcagcagcaacttataatgtgatgaaatacggtgcaaaagcg
gacggcaaatcagactcaacccaagcgtttgtcaagacatgggcagcagcatgcagctct
aatcagacagccaccatgtacgtccccaaaggaaggttcttgctaaaagctgcagtgttc
agaggcccttgcaagagtagaattaaagttcagatatacggatccttgattgcccctact
gattattgggcgctaggaaactccggctactggatcctattcattaaggtcaatcgactc
gcagttttcggtggtacactggacggcaaaggagctggcttttgggcttgcaggaaagcc
ggaaagagctgccctgttggagctaggtcgataacgttcaattgggcaaatgacgttgtg
ataagtggtttagtgtcgatcaacagtcagcaaactcatcttgtgatcaacagctgcaac
aatgtggtggtcagaaacgttaagttggttgctccggctgacagccccaatactgatggc
attcatgtgcagagctcaactggtgttactatcaccggcgcaaccttgcaaaccggagac
gattgtgtatcaattggagctggcaccaaaaacctctacatgagtaacatcaagtgcggc
ccaggacatggcgtaagcattggtagtctaggcaaggaagcgaacgaagctggggtccaa
aatgtgacgttaacgaatgcagttttcagtggatcggacaatggagtgcgaataaagaca
tgggccaggcccagcaacgggtttgtgaccaacgttctcttccggaacatcatgatgagg
aatgtcgagaaccccatcatcatcgatcagaactactgcccaaataacaacggttgccct
aaccagacttctggtgtaaagattagtcaagtgacatacaagaacatacaagggacgtcg
gcaacggcggaggcagtaacatttgattgcagcccaagcaatccgtgcagagggattaga
ttggaagacatcaagctcacatacatgaatcaattagccacatcttcatgcaagaacatc
gatggaaccagcacgggagtgctcatgccccagagttgcgtcgcaagttga
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