Fragaria vesca (woodland strawberry): 101296527
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Entry
101296527 CDS
T02666
Name
(RefSeq) DNA polymerase alpha catalytic subunit
KO
K02320
DNA polymerase alpha subunit A [EC:
2.7.7.7
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101296527
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fve03032
]
101296527
Enzymes [BR:
fve01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
101296527
DNA replication proteins [BR:
fve03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase alpha / primase complex
101296527
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B
zf-DNA_Pol
DNA_pol_B_exo1
DNA_pol_alpha_N
DNA_pol_B_exo2
TAF4
DNA_pol_B_2
Motif
Other DBs
NCBI-GeneID:
101296527
NCBI-ProteinID:
XP_004289559
LinkDB
All DBs
Position
LG1:20754325..20765283
Genome browser
AA seq
1532 aa
AA seq
DB search
MADDEQPIGGRRRSRGADAAARSSALERLKALREGGRRSGNSDDRFQIKLEKPIYDTVDE
DEYDAIKAKRREEFGDFIEDDDGLGYRDDGEEEDWTRRGLPTSSDESDGDARPKRKKVEK
KEKEKEPRVKKPNASLTAAAAMMGKQRLSSMFTSSVFNKSRDGDKGKGLSCDSIVDEVIA
EFAPDEADREKRRRAQPVKSFVPIRGVKSERVSNGGVDLARRLELDRIVANGGVSVDSKE
MDKDSEVDFGNCKPQIEQLHDFLENSEVPGEKKTEDSVEVLAEPVVKKEDVFTLNAKIKE
ADDPALSAMAGWKAAMTGGGGAGVTGADSVEVKASEGSLDFDLESDGSLPFYMLDAYEEF
YGPSMGIVYLFGKVNVGSSYQSCCAVVKNMQRCVYAIPDSPLIQTDEMMKLEKDVEESRI
SPTDFRKKLHDAASELKNEIAKKLLDLNVSAFSMTPVKRNYAFERTDIPVGENHVLKINY
PFRDPPLSADLKGETFSALLGTHSSALELFLVKRKIKGPSWLSVSNFSVCPAPQRVSWCK
FEVIVNAPKDIRVSASTKKTVDIPLLVVTAISLKTIINEKQNVNEIVSASVVCCNKAKID
TPVKDSEWKSPGMLSHFTVVRKLDGGIFPMGFTKLAGDKNSKAGSNVLSIEGSERALLNR
LFIELYKLDSDVLVGHNISGFDLDVLLHRAQVCRVPSSMWSKIGRLKRSVMPKLAKGSTI
FGSGASPGIMSCIAGRLLCDTYLCSRDLLKEVSYSLTQLAQTQLGQNRKEITPHDIPRMF
QKSEFLMELIEYGETDAWLSMGLMFHLSVLPLTRQLTNISGNLWGKTLQGARAQRVEYLL
LHAFHAKKYIVPDKIPHMKDTKLTKRRTNKGVEEKAAEELDVGDVNVVNDPQSGHGKGKK
GPAYAGGLVLEPKRGLYDKYILLLDFNSLYPSIIQEYNICFTTVERNSEELVSHLPSSQR
PGLLPELLKNLVERRRKVKSWMKNASGLKFQQLDIQQQALKLTANSMYGCLGFSNSRFYA
KPLAELITLRGREILQSTVDLVQNNLNLEVIYGDTDSIMIYSGLDDCAKAKAIAVKVIQE
VNKKYRCLEIDLDGLYKRMLLLKKKKYAAVKEITKNEKKYEVIECKGLDMVRRDWSLLSK
EVGDFCLSQILSGGSSEDVVESIHNSLTKVQEDMRKGQVPLEKYIITKTLTKPPEAYPDG
KNQPHVQVAQRLRQNGYSTGCSVGDTVPYIICCEQGMNSDNSTGIAQRARHPDELKQEDG
KWMIDIDYYLSQQIHPVVSRLCASIQGTSPQRLADCLGIDSSKFKTNSSEAVRNDSSSLF
FSTDDEDRYRDCKSLILACPSCSGTFDCPAIFNSIAKSISEKPTRPQGEESSSDFWCRLR
CPKCPEEGDVGRLSPVMIANQVKRQADSFVSMYYKGIMTCDDEICKYTTRSLNLRLVGDS
ERGTVCPNYPHCNGRLVRKYTEADLYKQLSFFCHILDTVRCIEKMEPKTRLLVELELAKI
RPIVTLAASTVERIRDRCAYGWIQLQDLFVTV
NT seq
4599 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgacgagcaaccgatcggcgggaggcgacggagccgaggagccgatgcggcg
gcgcggtccagcgccctggagcgtctcaaagctctccgtgaaggcggccgccgctcggga
aactccgacgaccggttccagatcaagctggagaagccgatctacgacacggtagacgag
gacgagtacgacgcgattaaagccaagcgccgcgaggagttcggggacttcatcgaggac
gacgacggcctagggtaccgcgacgacggcgaggaagaggactggacacgccgcgggctg
cctacgtcgtcggatgaatcggacggcgatgcgaggccgaagaggaagaaggtggagaag
aaggagaaggagaaggagcctcgggtgaaaaagcccaacgcgtcgctcacggcggcggcg
gcgatgatggggaagcagcggctttcgtcgatgttcacgtcgtcggtgtttaataagagt
agggatggtgacaagggtaagggattgtcttgtgatagtattgtggatgaggtgattgcg
gagtttgcgccggatgaggctgatagggagaagcggcggagggcgcagccggtgaagagt
ttcgttccaattaggggtgtcaagagtgagagagtgagtaatgggggtgttgatttagca
aggaggcttgaattggatcgaattgttgcgaatggcggtgtttctgtggatagtaaggaa
atggataaagattcggaggtggatttcggaaattgtaagccacaaattgagcaattgcac
gattttttggagaatagcgaggtgcctggtgagaagaagactgaggattctgttgaggtg
ttggcggagcctgtggtgaagaaggaagacgttttcactttgaatgcaaagattaaggaa
gctgatgatccggcattgagtgctatggccggatggaaggcggcgatgactggtggtggt
ggtgctggggttactggggcagacagtgtggaggtcaaagctagtgaagggagtttggat
tttgatctggaatcagatgggtcactgcccttttacatgcttgatgcttacgaagagttc
tatggacctagtatgggcattgtttatctatttgggaaggttaacgtaggaagttcatat
cagagttgttgtgcggttgtcaagaacatgcaaagatgtgtctatgcaattcctgacagt
cctttaattcaaactgatgaaatgatgaagctcgaaaaggatgttgaagagtcaaggatt
tcacccacagattttcgaaagaagctgcatgacgcagcttcagaattaaagaacgaaata
gcaaagaagttgttggatctcaatgtatcagcttttagcatgacacctgtcaagaggaac
tatgcttttgagcgaactgacataccagtaggggaaaatcatgtactgaagataaattat
ccattccgggatcccccactatcagcagatctaaaaggagaaactttttctgctcttctg
ggaactcatagcagcgcattggaacttttccttgttaaaaggaagataaaaggaccttct
tggctatcagtttcaaatttttctgtctgcccagctccacaacgggtaagctggtgcaaa
tttgaggtgatcgtcaatgctccgaaagatataagggtctcagcttccacgaaaaaaact
gtagatatccctctattggttgttactgcaataagtttgaaaactataatcaatgagaag
cagaatgttaacgaaattgtctctgcatctgttgtctgctgtaacaaggccaagattgac
actcccgtgaaggactcagaatggaagagtcctggtatgctgagccactttactgttgtc
cgtaagcttgatggaggcatatttcccatggggtttactaaactagctggagataagaat
tctaaagctggatcaaatgtcttgagcattgagggcagtgaaagggctttgctgaaccgt
ttgttcattgaattatacaagttggatagtgatgttctcgttggacataatatatcagga
tttgatttggacgttcttctccacagagctcaggtttgcagagtgccaagcagcatgtgg
tccaaaataggccgcctcaagcgttctgtgatgcctaagcttgcaaaaggaagcaccatt
tttggctctggagcaagtccagggatcatgtcctgcattgctggtaggctgttgtgtgat
acatacttgtgttcccgtgacttattaaaggaggttagctattctttgacacaacttgca
cagactcagctgggccaaaaccggaaggagatcacaccacatgatatacctagaatgttc
caaaaatctgagtttctcatggaacttattgaatatggcgagacagatgcatggttgtct
atgggactcatgtttcatttgagtgttcttcctctcacacgtcagctgaccaatattagt
ggtaatctgtgggggaaaactctccaaggtgcaagggcacaaagagtcgaatacctctta
cttcatgcttttcatgcgaaaaagtatatagttccggacaagattcctcatatgaaggat
accaaattgacaaaacggagaacaaataagggagttgaggaaaaagctgctgaggagttg
gatgtaggtgatgtcaatgttgttaatgatccacagagtggtcatgggaaaggcaagaaa
ggtcctgcctatgctggtggattggttttggagccaaaaagaggtttatatgacaagtat
atattacttctggacttcaatagtctttacccgtctattattcaggaatataatatatgc
ttcacgactgttgaaagaaattcagaagaattggtttctcatttaccttctagtcagaga
cctggacttttacctgagttgctaaaaaatctagtcgaaaggaggagaaaggtaaagtca
tggatgaagaatgcatctggtctcaagttccagcaacttgacattcaacagcaagccctg
aagctgactgcaaacagtatgtatggatgcttgggattttcaaattcaagattttatgca
aagccactagcagagcttataacactaaggggcagggagatcctacaaagtactgtggat
cttgttcagaacaatttgaacttagaggttatttatggtgataccgattcaataatgatt
tatagtgggctggatgattgtgcaaaagcaaaagcaattgctgtaaaagtaattcaagag
gttaacaagaagtatagatgtttagaaattgatcttgacggcttgtacaagagaatgctg
cttctcaagaaaaagaaatatgcagctgtgaaagagataacgaaaaacgagaaaaaatat
gaggttattgagtgtaagggccttgatatggtacgtcgtgactggagcttactttcaaag
gaagtgggagatttctgcctaagtcaaatattgtcaggagggtcatctgaggatgttgtt
gaatcaattcataactctcttacaaaggtgcaagaggacatgagaaaaggacaagttccc
cttgagaaatacatcatcaccaagacattaactaaaccaccagaagcctacccagatggc
aaaaaccagccacatgttcaagtggcgcaaagattgaggcaaaatggttactctactggt
tgctctgttggtgatacagttccttatattatatgctgtgagcagggcatgaattcagat
aattctaccgggattgctcaacgtgctagacatcctgatgaactaaaacaagaagatgga
aaatggatgattgacattgattactacttgtcccaacagattcatcccgttgtatcacga
ctttgtgcttcaattcagggtaccagtccccaacgcttggctgattgtttagggattgat
tcatccaagttcaaaactaattcaagtgaagctgtcagaaatgattcttccagcttgttc
ttttctactgatgatgaagacagatatcgggattgcaagtctttgatcttagcatgtcct
agctgctctggtacttttgattgtccagccatcttcaactccattgcaaagtcaatcagt
gaaaagccaacaaggccacaaggcgaggaatcttccagtgatttttggtgcagattgcgc
tgtccaaaatgcccagaggaaggtgatgtgggcagactgtctcctgtaatgatagcaaat
caggtcaaaaggcaagcagacagttttgtttcaatgtactacaagggcataatgacgtgt
gatgatgaaatttgcaaatacaccacacgaagtctcaacctccggcttgttggtgattct
gagagaggaacagtctgtccaaactatccccactgcaatgggcgtcttgtaaggaagtac
acggaagctgatctatacaagcagctctcatttttctgtcacatcttggatacagtacgt
tgcatagaaaagatggaacctaagaccagactgctggtcgagctagagttggccaaaatt
cgcccaattgtgactttggctgcctcaacagttgaaagaattcgggaccgttgtgcctac
gggtggatacagctgcaagatctttttgttacagtttag
DBGET
integrated database retrieval system
