Fragaria vesca (woodland strawberry): 101296533
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Entry
101296533 CDS
T02666
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
101296533
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
fve04040
]
101296533
Ion channels [BR:
fve04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
101296533
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
101296533
NCBI-ProteinID:
XP_011470271
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Position
LG7:complement(21676779..21691639)
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AA seq
648 aa
AA seq
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MAVQSSRRILSGDIEENGDERIQKANGIYSSASLASVDWAANNVSKAMVPLFEGLKSFSK
TMKIYYGVLSIGLSSNKKILDSQRQKSVQQLWNKMLLVLCVITLSLDPLFCYILVVNDEK
KCLRLDRKLRAIATVLRSVVDFFYLFYIIYQFRASYVTLFSKSSRGGNLAPDTQARARRY
LLYFIFDILVILPLPQGIVYGIIPRLNNSRVFHATQSLYFIVIFQYVLRVLRICSLLKEA
ARSSGILSETAWAKAAFNLFLYMLASHVVGAIWYFFSIERKTSCWRKSCKMHAIAHCSLY
CDDSFGASTFLNDSCSPKTPNSTFFDFGIYFGALEYGVIESTDFLAKISYCFWWGLQNLS
SLGQSLKTSTYLWEVYFSVFVSLTGLILFAFLIGNMQTYLQSKTARLEEMRLKGQEIELW
MAFHSLPRNLKKKMRQYQKYKWQETKGVDVESFLRNLPRDTRTQIKQHLCSDSLSKVPML
QNMDKRLLEAIYDHLKPVLYIEHSFILRKGDPLDEMLFITRGKVLTYTTAGREGADCLEK
GDFYGQELLDWVLKTPNPSLSNLPFSTKTVQAHTKVEVFALRANDLKNVVSKFWWLSPAL
VWSNYANRRQLRLCKQHGAAINSFKLRIPGLRRAVSLALNMLQYSQVP
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggcggttcaatcatcaaggagaatactgagtggtgatatagaagaaaatggtgatgaa
cgaattcaaaaggctaatggcatttattcaagtgcaagtttagcatcagtggactgggct
gccaataacgtctctaaagctatggtgcctcttttcgaagggctaaagagttttagtaaa
accatgaaaatttattatggagttctgtcaataggcttgagttcgaataagaaaattctt
gacagccagcgccagaaatcagtccagcaactctggaataagatgcttcttgttctgtgt
gtcattacgctctcactggatcctttgttttgctatattcttgtggttaatgatgaaaag
aagtgtcttcgattggacagaaaattaagagctatagctacagttctgcgatctgttgtg
gatttcttctatctgttttacatcatttatcaatttcgtgctagttatgtcactcttttt
tctaaatcatcgagaggaggtaatctggctccggatactcaggcaagagcaaggaggtat
ttgttgtacttcatattcgacatccttgtaattcttccacttccacaggggatagtttat
ggtatcattccaagattgaataactcgagggttttccatgcaacacagtccttgtacttc
atagttatctttcaatacgtgctaagggttcttcgaatctgctcattgttaaaagaagct
gcaaggtcttctggcatcctctcagaaactgcatgggctaaagctgcctttaatcttttt
ctttatatgctagccagtcatgttgttggagccatctggtacttcttttcgatagaaagg
aaaacatcctgctggcgaaaatcttgtaaaatgcatgctattgctcattgttcgttatat
tgtgacgatagttttggagctagcacttttctgaatgactcttgttctccaaagacgcca
aattccacattttttgattttggaatatactttggtgctcttgaatatggtgtcattgaa
tcaacagatttcttggcaaagatctcttactgcttttggtggggactgcagaacctgagt
tccctgggtcaaagcctcaaaacaagtacctatctgtgggaagtctacttctcagttttt
gtttcactcactggattgatactgtttgcatttctgattggaaatatgcagacatatttg
caatcaaagacagcaaggctagaggaaatgagattgaaggggcaagagatagagttgtgg
atggccttccattcccttcctcggaatctcaagaagaaaatgaggcaataccagaaatac
aaatggcaagaaactaaaggtgttgatgtggagagttttcttcgcaatcttccccgggac
accagaacgcaaataaagcagcatctgtgttccgattcactcagtaaagttccaatgctt
caaaacatggataaacgtttgcttgaggcaatatatgatcatctcaagccagtgctttat
atagagcacagcttcatactacggaaaggtgaccctcttgatgagatgctgttcatcact
cgcggcaaggtattgacttacaccaccgcaggcagagaaggtgctgattgtcttgaaaag
ggtgacttctatggccaagaacttcttgactgggtgctcaagactcccaatcctagccta
tccaaccttccattctcaactaaaacagtccaagcgcacacaaaagttgaagtgtttgct
cttagggccaatgacttgaagaatgtagtctccaagttctggtggctttcaccagctctg
gtatggagcaattacgcaaaccgaaggcagctcaggctttgcaagcagcatggcgccgcc
ataaacagcttcaaattaaggatccccggtctaaggagggcagtgtcactcgcactgaac
atgctgcagtactctcaagtcccttga
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