KEGG   Fragaria vesca (woodland strawberry): 101296783
Entry
101296783         CDS       T02666                                 
Name
(RefSeq) flowering time control protein FY-like
  KO
K15542  polyadenylation factor subunit 2
Organism
fve  Fragaria vesca (woodland strawberry)
Pathway
fve03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:fve00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    101296783
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fve03019]
    101296783
Messenger RNA biogenesis [BR:fve03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     101296783
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_EML WD40_Gbeta EIF3I Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_WDR75_1st Beta-prop_RIG_2nd
Other DBs
NCBI-GeneID: 101296783
NCBI-ProteinID: XP_004301845
LinkDB
Position
LG5:complement(25867681..25868924)
AA seq 347 aa
MAPECHRHHPYSRPQPSFKASGPIRHQTQVASVVRYAQNRMSSAVVYSGIPSRSAPASRL
VRCCRNYRTRASAINRVLWTPSGRLITGSRNGEFTVWDGLSFRHELTVEEAHDHSIRSMV
WSFEHEDWISGDDGGCIKYWKTNMTNVWDYETCQEERRLTGHSWNVTSVDWHPTKSLVAS
GGKDGVVKLWDARTARELCSFYDHNSWVNSVKWNQNGNWLLTASKDQEDYLVSGTGDGSI
LHWLVGHLSPQVQLPNAHNSNNYNNSVWDLKWHPMGHMLCSGSNDRTTKFWCNNDESDIN
ENQSFGVLNSAFAAYMSCSFPLPFHEEQPSLVAKREGTVIPGVGIAI
NT seq 1044 nt   +upstreamnt  +downstreamnt
atggcgccggagtgtcaccggcaccacccttatagccgtcctcaaccgtcgttcaaggca
tctggtccgattcggcaccaaacccaagtcgcctccgtcgtccgatacgcccagaaccgg
atgtcgtcggcggttgtttattccggcatcccatcaaggtcggcgccggcttcaaggctt
gtacgttgttgtagaaattacaggacccgcgcttctgcgatcaatcgggttctgtggaca
ccttccggcaggctgatcaccggctcccgaaacggcgagttcactgtttgggatggcctc
tcgtttcgccatgaattgaccgttgaggaggctcatgatcattccatcaggtccatggtg
tggagttttgaacatgaagactggatctctggtgatgatgggggatgcatcaagtactgg
aagaccaacatgaccaatgtctgggattatgagacctgccaagaggagcgcagattgact
ggccatagttggaatgtgaccagtgtcgactggcaccctacaaagtctctggtagcctct
ggtgggaaggacggtgttgtcaagctgtgggatgcaaggacagcaagagagctttgctct
ttttatgatcacaacagttgggtcaactctgtcaagtggaaccaaaacggtaactggctc
ctcactgcttccaaggatcaggaagactatcttgtcagtgggactggtgatggatccatt
cttcattggctagttgggcatctatctccccaggttcaacttcctaatgcacacaatagc
aataactataataacagtgtgtgggatttgaagtggcatcctatgggtcatatgctttgc
agtggcagcaatgatcgcactactaagttttggtgtaacaatgatgaatctgatattaat
gagaatcaaagttttggtgttctaaattctgcttttgctgcttacatgtcttgtagtttt
cctttaccatttcatgaagaacaaccttcactcgttgctaagagagaaggaaccgttatt
ccaggtgttgggattgcaatttaa

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