Fragaria vesca (woodland strawberry): 101296792
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Entry
101296792 CDS
T02666
Name
(RefSeq) branchpoint-bridging protein-like
KO
K13095
splicing factor 1
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101296792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fve03041
]
101296792
Spliceosome [BR:
fve03041
]
Complex A
Other components
Complex A specific factors
101296792
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
zf-CCHC
eIF3g
PHD_4
KH_PNO1_2nd
RRM_5
DUF8363
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
101296792
NCBI-ProteinID:
XP_011466704
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All DBs
Position
LG6:complement(11303528..11307111)
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AA seq
731 aa
AA seq
DB search
MEALPPNPNPPPIRDDEPEHDPPYFPAISDSKPPPPPPPQSPQTLAPGAGIPSQDPETAA
ENGDCTKPVSNGEEETSGRRRRRSRWDPQPEPDGGARKRKSRWADEEPKPVVQFMGGIEF
DPEIQALNSRLVEISRILFSGSVLDDRPEGERSPSPEPVYDNFGIRINTREYRARERLNR
ERQEIIAQIIKRNPTFKPPADYRPPKIHKKLYIPLKEYPGYNFIGLIIGPRGNTQKRMEK
ETGAKIVIRGRGSVKEGRLQQKRDSKPDLSENEDLHVLVEGETQEAVDAAAGMVEKLLQP
VDEVLNEHKRQQLKELALLNGTIREEEFCRLCGEPGHRQYACPSRTSTFKSEVLCKICGD
GGHPTIDCPVKGTNGKKMDDEYQNFLAELGGTMPESATKQTGTLALGSGSSGSNPPWPNN
AGGPSSTAHPGLGSTGLKPPKEHDDTNLYIGYLPPTLDDDGLIGLFSRFGNIVMCKVIKD
HATGLSKGYGFVKYADVEMANSAIASMNGFSIEGRTIAVRVAGKPPQPVLPPGPPASAMS
PYTVSSQLAGAYPSQQFTPGGPLGNVPPTSYAGTPLPWVSPVSHSYTPYTPPPPLPFGMY
PLPLPGPPMAAYGAQYPPPPGASPQLVTSSEAQQSYPPPGVQSETPTQSAPTNIYAMPTN
GQHAHPVSAYNYQSFAPPPSPGPVPGSTAHQSQSIGNVPWATSTPVPPPTSAEKARNGAD
AEYEKFMAEMK
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggaagctcttccaccaaaccctaaccctcctccgattcgcgacgacgaacccgaacac
gacccgccttattttcccgctatctccgattcaaaacctccgcctccgcctccgccgcag
tcccctcaaaccctagctcccggcgccggaatcccctcacaggatcccgagactgctgct
gagaacggcgactgtaccaaaccggtttccaatggagaggaggagacctcgggcagacgc
cgccgccgcagccggtgggacccgcagccggagccggacggcggcgcgaggaagaggaag
tcgcggtgggccgatgaggagccgaagccggtggttcagttcatgggaggtattgaattc
gatcctgaaattcaagctttgaatagtaggcttgttgagattagcaggattttgttttcc
ggttcggttttagatgatcggccggaaggggagaggtctccgtcgccggagccggtgtat
gataactttggaattaggattaatacgagagagtatcgagcgcgtgagaggttgaataga
gagaggcaggagattattgctcagattattaagaggaaccctacatttaagcctccggcg
gattacaggccgccgaagattcataagaagctgtatatacctttgaaagagtaccctggt
tataattttataggacttataatcggccccagggggaatactcagaagaggatggagaag
gagactggtgctaagattgtcatcaggggcagaggctcggtgaaagagggtaggttgcaa
cagaagagggactcgaaaccggacctttcggagaacgaggacttgcatgttttggttgag
ggtgaaacgcaggaggctgttgacgctgcggctgggatggtggagaagctgttgcagcct
gtggatgaggtgttgaatgagcataagaggcagcagcttaaggaactggcgttgttgaat
gggacgattagggaagaggagttttgtaggttatgtggtgagccagggcatcgtcagtat
gcttgtccgtcacgaacgtcaacatttaagagcgaggttctttgcaagatatgtggtgat
ggtgggcatccgactattgattgtccagtgaagggtacgaatgggaagaaaatggatgat
gagtaccagaactttttggctgagttaggtgggacaatgcctgaatcagctactaagcag
actggtactttggctcttggctcaggcagctcaggaagcaatcctccttggcctaataat
gctgggggtcctagcagtacagcacatccaggattgggctcaactggattgaagcctccc
aaggaacatgatgacacaaatttgtacatagggtacttgccacctacacttgatgatgac
ggtttgattgggttgttttcacgtttcggcaatattgtgatgtgcaaagttattaaggac
catgccactggattgagtaaaggttatggatttgtgaagtatgctgatgttgaaatggct
aatagtgctattgcaagcatgaatggtttttccatcgagggtcgaaccattgctgtcaga
gttgctggcaagcctccacagccggttctgcctcctggaccaccagcttcggcaatgtca
ccttacacagtctcaagccagcttgctggtgcttatccatcccagcaatttaccccaggt
ggtcctcttgggaatgtaccacccactagttatgcaggaactccacttccttgggtatcc
cctgtttctcattcatatactccgtatactcctccacctccccttccttttggcatgtat
cctcttcccttaccgggtccacctatggctgcatacggtgcacagtaccctcctcctcct
ggtgcctcacctcagctggtgacgtcaagtgaagcacaacagagttaccctcctccaggg
gttcagtctgaaacccctacccaatctgctccaacaaatatatatgcaatgccaacaaat
ggccaacatgcccatccagtgtctgcgtataattaccaatcttttgcaccgcctccctcc
cccggacctgtacccggttcaactgcacaccaatcccagagcattggtaatgtgccatgg
gccacaagtactcctgttccccctcctacttctgcagagaaagcaagaaatggtgcagat
gcagagtatgagaagttcatggcagagatgaaatga
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