Fragaria vesca (woodland strawberry): 101296926
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Entry
101296926 CDS
T02666
Name
(RefSeq) protein transport protein SEC23
KO
K14006
protein transport protein SEC23
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101296926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fve04131
]
101296926
Membrane trafficking [BR:
fve04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
101296926
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
101296926
NCBI-ProteinID:
XP_004291791
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Position
LG2:complement(31566817..31571993)
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AA seq
782 aa
AA seq
DB search
MDFVELEAIEGLRWSWNSWPSSKADQAALVIPLAVMCTPLMQQAELPLLPYDPVTCSQCG
AVLNPYARVEYTSRIWFCSLCLHKNTFPHSYSNIGDTNLPAELFPTYSAVEYARAAAPPP
PPSHNWSGANGVLLLSSSSSLSSMVSSSPNSGSDDPRGIRPAFVLVVDVATPRDELAALK
NELLLVLEQLPETALVGLVTFDSMVRVHDLEFSDCSRVVVLHGERELSPVQIQQFLGINR
TKQQQMGKMPFSQKQGFLLPVSECEFNISTAIEEIQSPVVKPGHRPGRSTGAAISAALGL
LEGCLVSTGSRIMVFASGPATIGPGIIVSSDLGYSIRTHRDLINGHAPYYSKSCSFYAQL
SQRLTDASIVLDLFACSLDQAGSAELKDPIERSGGFMMLGESFESIEFRKCLRQIFTRDE
EGYLKMYFDATIEIVTTKDVKICGALGPCVSLRKVNNLVSSSEIGEGGTYIWKLGTITNK
TCITFFFEVSDEQKVQPGSAFFIQFITRYRHGNMGIRKRVTTAARRWVGNRSPEIAAGFD
QETAASVMARLAIHRAETCFARDVIRWLDDTLIQFASKFGDYVEEDPSSFRLASNFSLFP
QFMYYLRRSQFIDVFNSSPDETAFFRLMLNREGVVGSLIMIQPTLLQYSFDGPPIPVLLD
VRSIAPDVILLFDSYFHVVIHYGSKIAQWRKLGYDKDPNHENLRKLLEAPEIDAQQLVAD
RVPAPKLIRCDQHGSQARFLLAKLNPSVTQNSTYTDGSDIILTDDLSLQVFLDHLQGLAV
QS
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggacttcgtggaattagaagccatagaaggcctccgatggtcctggaactcctggccg
tcttccaaagccgaccaagccgctctcgtcatccccctcgccgtcatgtgcacgccgtta
atgcaacaagccgagctccctctcctcccctacgaccccgtcacctgctcccaatgcggc
gccgttttgaacccctacgcacgcgtcgagtacacctcccgcatctggttttgctccttg
tgcctccacaagaacaccttcccccactcctactccaacatcggcgacaccaatcttccc
gccgagctcttccccacttacagcgccgtcgagtacgcccgagccgccgcgccgccgccg
ccgccgagccacaactggtcaggcgccaacggcgtgctcttgttgtcgtcgtcgtcgtcg
ctgtcgtcgatggtgtcgtcgtcgccgaactccgggtcggacgatccgcgagggatccga
cccgcgtttgtgctcgtcgttgacgtggccacgcctagggatgagctggcggcgctgaag
aatgagctgctgcttgtactggagcaactgccggagactgctttggtggggctagtgacg
tttgattccatggtgcgtgttcatgatcttgaattctccgactgctccagagtggttgtg
cttcacggagaacgggagctttcgccggttcagattcaacaatttctgggaattaatagg
actaagcagcagcaaatgggaaaaatgcctttttcccaaaagcaagggttcttgctacca
gtatccgagtgtgagttcaacatttcaactgcaatagaagaaatccagtctccagtagtc
aagcctggccatcgcccaggaaggtcaacaggagcagcaatttcagctgcacttggactt
ttggaaggatgcttggtgagcactggctctaggatcatggtcttcgcatctggacctgca
actataggcccgggaattattgtaagctctgatcttggttattccatccgaactcatcga
gacctgatcaatggtcatgccccttattatagtaaatcttgcagcttctacgctcaactg
tcacagaggttaactgatgcatctattgtcctcgatttgtttgcttgttctcttgatcaa
gctggctctgcagagcttaaggaccctattgagagatcgggtggtttcatgatgctaggt
gagtcctttgagtcgattgagttcagaaaatgtttgcggcaaattttcactcgtgatgaa
gagggatatttgaagatgtattttgatgcaactattgagatagtgaccactaaagatgtt
aaaatctgtggagccctaggtccttgtgtatctcttcggaaagttaacaatttagtaagt
agcagtgagatcggtgagggtggtacctatatatggaagttaggtactattaccaataaa
acatgcatcacttttttctttgaagttagtgatgagcagaaagttcaacctgggtcggca
ttcttcatacaattcataacacgataccgacatgggaacatgggaatccggaaacgggtg
actactgctgcaagaagatgggttggtaaccgttcaccagaaattgctgctgggtttgat
caagaaacagctgcttctgtgatggccaggcttgctattcaccgagctgagacctgtttt
gctcgagatgttattagatggctggatgacacgttgatccaatttgcttcaaaatttgga
gattatgtggaggaagatccatcttctttccgcttggcatccaacttctctctttttccc
caattcatgtattacttgaggaggtctcagtttattgatgtctttaatagtagtcctgat
gagacagctttcttccggctgatgctgaaccgtgagggcgtagtgggttctcttatcatg
atccagcctacacttctccaatattcctttgatggtccacctattccagtcctcctggat
gttcgctccatcgctccagatgttatcttgctctttgattcttactttcatgtggttatt
cactatgggtcgaagattgctcagtggaggaagcttggttatgacaaggatccaaatcat
gagaatttgaggaagctgctggaagccccagaaattgatgcacagcagttggtggctgac
cgtgttcctgcaccgaagctcattagatgtgatcagcatggtagccaggcaaggtttctt
cttgcaaagttgaatccatcagttacccagaattcaacatacacagatggctctgatatt
atcttgactgatgatttgagcttgcaagtatttttagatcacttgcagggcctggccgtg
caaagctga
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