Fragaria vesca (woodland strawberry): 101297017
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Entry
101297017 CDS
T02666
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00040
Pentose and glucuronate interconversions
fve01100
Metabolic pathways
Module
fve_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101297017
Enzymes [BR:
fve01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
101297017
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
ET
Motif
Other DBs
NCBI-GeneID:
101297017
NCBI-ProteinID:
XP_004309009
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Position
LG7:19343179..19344700
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AA seq
362 aa
AA seq
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MKYGAKADGITDSTQAFLKTWAAACSSRQTAFMYVPKGRFLLKAAVFRGPCKSRVLVQID
GTLIAPTDYRALGNSGYWILFIKINGLGVYGAKLDAKGAGFWACRKSGKSCPVAARSITF
NWVNNLVISDLVSINSQETHLVINSCKNVVVRNVKLSAPADSPNTDGIHVQGSTWVTITG
ATLMTGDDCVSIGPGTKHLHMNKIMCGPGHGVSIGSLGKDVKEAGVQDVTLTNAVFSGSD
NGVRIKTWARASTGFVTNILFQNIVMRNVKNPVIIDQNYCPSKNCPNQSSGVKISQVTYK
NIQGTSATAEAVTFDCSPSNPCRRIKLQDIKLTYLNKVATSSCNNIDGTSTGVLMPQSCV
RS
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatggggcaaaagcagatgggatcacagactcaacccaagcatttctcaagaca
tgggcagcagcatgcagctctcgccagacagccttcatgtacgtccccaaaggaaggttc
ttgctgaaagctgcagtattcagaggcccttgcaagagtagggttctggttcagatagac
ggaactctcattgcccctactgattatcgcgctttgggaaactccggctactggatcttg
ttcattaagatcaatggacttggcgtttacggtgctaaactcgatgccaagggagctggc
ttttgggcttgccggaaatctggaaagagctgccctgttgcagctaggtcgataacgttc
aattgggtaaacaaccttgtgataagtgatttagtatccataaacagccaggaaactcat
cttgtgatcaacagctgcaaaaatgtggtggttcgaaacgttaagctgtctgctccggcc
gacagccccaacactgatggcattcatgtgcagggctcaacttgggttactatcaccggt
gcaacattgatgaccggagacgattgtgtatcgattggtccgggcaccaaacacctccac
atgaacaaaatcatgtgcggcccaggacatggtgtaagcattggtagtctaggcaaggat
gtgaaggaagctggggtgcaagatgtgacgttgacgaatgcagttttcagtggatcggat
aatggagtacgaataaagacatgggcaagagccagcactgggtttgtgaccaacattctc
tttcagaacatcgtgatgaggaatgttaagaaccccgtcatcatcgatcagaactattgc
ccaagtaaaaactgccctaaccagagttctggtgtgaagattagtcaggtgacatacaag
aacatacaagggacgtcggcgacggcggaggcagtgacatttgattgcagcccaagtaac
ccatgcagaaggataaaattgcaggacatcaagcttacgtacctgaataaggtagccaca
tcttcatgcaacaacattgatggaaccagcaccggagtactcatgccccagagttgcgtc
agaagttga
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