Fragaria vesca (woodland strawberry): 101297135
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Entry
101297135 CDS
T02666
Name
(RefSeq) putative chromatin-remodeling complex ATPase chain
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101297135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fve03021
]
101297135
03036 Chromosome and associated proteins [BR:
fve03036
]
101297135
Transcription machinery [BR:
fve03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
101297135
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
101297135
RSF complex
101297135
WICH complex
101297135
B-WICH complex
101297135
NORC complex
101297135
BRF complex
101297135
NuRF complex (fruit fly)
101297135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
HDA2-3
DBINO
DEAD
Myb_DNA-binding
CHDII_SANT-like
AAA_14
ToxN_toxin
Motif
Other DBs
NCBI-GeneID:
101297135
NCBI-ProteinID:
XP_004296801
LinkDB
All DBs
Position
LG4:10543873..10551085
Genome browser
AA seq
1063 aa
AA seq
DB search
MARPPKPVSSDEAMSNSEEEEPINDEEDEEELEAVARSADSEDEEAADDNSRGSDDEAAP
AENDDELEEDEDGGNESNAEVSKREKARLKRMEQMKKQKIQEILDAQNAAVDADMNNRGK
GRLQYLLQQTELFAHFAKGDPSASQKKGKGRGRHASKKTEEEEDEECLKEEEDELTGTGT
TRLLTQPSCESYFFFXFFFXFFENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHM
VVAPKSTLGNWMNEIRRFCPVLRAVKFLGNPDERKHIREDLLVAGKFDVCVTSFEMAIKE
KSCLRRFSWRYIIIDEAHRIKNENSLLSKTMRLYNTNYRLLITGTPLQNNLHELWSLLNF
LLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILK
VGMSQMQKQYYKALLQKDLEVVNAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTG
DHLITNAGKMVLLDKLLPKLKERDSRVLIFSQMTRLLDILEDYLMFKGYLYCRIDGNTGG
EDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHR
IGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRFG
AEMVFSSKDSTITDEDIDRIIAKGEEATAELDAKMKKFTEDAIKFKMDDTAELYDFDDEK
DDKFDFKKIVSENWIEPPKRERKRNYSESEYFKQTMRQGAPVKPKEPRIPRMPQLHDFQF
FNTQRLSELYEKEVRYLMQNHQKNQLKDTTIEVDEPEEVGDPLTAEELEEKERLLEEGFS
SWSRRDFNTFIRACEKYGRSDIQSIVAEMEGKTEEEVERYAKVFKERYKELNDYDRIIKN
IERGEARISRKDEIMKAIGKKLDRYKNPWLELKISYGQNKGKLYNEECDRFMICMVHKLG
YGNWDELKAAFRTSPLFRFDWFVKSRTTQELARRCDTLIRLVEKENQEVDERERQARKEK
KLAKNMTPSKRGTGRQPTESPSSMKKRKQLTMDDYVSTGKRRR
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgacccccgaagccggtctcttccgacgaagccatgtccaattccgaggaggag
gagccgatcaacgacgaagaggacgaggaggagctcgaggccgtcgctcgctccgccgac
tccgaagacgaagaggccgccgatgacaactcccgcggctccgacgacgaggcggccccg
gctgagaacgacgacgagttggaagaggatgaggatggaggtaatgaaagcaatgctgaa
gtgagcaaacgtgagaaggccaggcttaaacgcatggaacagatgaagaagcaaaaaatt
caggaaatattagacgcgcaaaatgcagctgtggatgctgacatgaacaatagggggaag
ggacggttgcagtatcttctgcagcaaacagagttgtttgcccattttgccaaaggtgat
ccgtctgcatcccagaagaaggggaagggaagggggcgccatgcttcaaaaaagactgaa
gaagaagaagatgaagaatgcctcaaagaggaagaagatgaattaactgggaccggaacc
acacggctcttgacacaaccttcatgtgagagttattttttttttttnttttttttttnt
ttttttgaaaatggcataaatggaatccttgctgatgagatgggtcttggtaaaactttg
caaaccatatccttgttgggttacctgcatgaattcagaggaataactggccctcatatg
gttgtcgctccaaagtcaacccttggaaactggatgaatgagattcggcgtttctgtcct
gtgttgcgtgctgtgaagtttctcggtaatcctgatgaaagaaaacacatacgtgaggac
ttgctggttgctgggaagtttgatgtttgtgttacaagttttgaaatggccatcaaagaa
aagtcttgcttacgacgtttcagctggcgatatataatcatcgatgaagcccatcgaatc
aagaatgagaattcactgctttcaaaaacaatgaggctgtataataccaactaccgtctt
ctaatcacgggcacaccgcttcagaataatcttcatgaactatggtctctgctcaacttt
cttctgccagagatttttagttctgccgaaacgtttgatgaatggtttcaaatatctggt
gaaaatgaccagcaggaggttgttcaacagcttcacaaggtcctccggccattccttctc
cgaaggttgaagtcagatgttgagaaaggtttgcctccaaaaaaggaaactatacttaaa
gtaggcatgtcgcaaatgcagaaacagtactataaggctttactgcagaaagatcttgaa
gttgttaatgctggcggagaacgtaagcgtcttttgaatatagctatgcagcttcgtaaa
tgctgtaatcatccatatcttttccaaggtgctgagcctgggcctccttatacaactgga
gaccatcttattacaaatgctggtaaaatggttcttttggacaagttacttcccaagttg
aaagagcgtgattctagggtcctaatattttctcagatgacaaggctgctagatattctc
gaagattatctaatgtttaaaggatacctctattgtcggattgatggaaataccggtggt
gaagaccgtgatgcttcaatcgatgccttcaataagcctggaagtgagaaatttgtattc
ttgctatcaactagagctggaggacttggtatcaatcttgctactgcagacgtcgtcatc
ctttatgatagtgattggaaccctcaagttgatctccaagcacaagatcgtgctcacagg
attggtcagaagaaagaagttcaagtgttccggttctgcactgagtataccattgaggaa
aaagtgatagagagggcttataaaaagcttgcccttgatgctctggtgattcaacaagga
cgattagctgagcaaaaaactgttaataaagatgagctacttcaaatggtaaggtttggt
gctgaaatggtttttagttccaaggatagcacaattaccgatgaggacattgatagaatc
attgcgaaaggagaagaggcaactgctgaacttgatgcgaagatgaagaaatttaccgag
gacgcgattaaatttaagatggatgatactgctgaattgtacgactttgatgacgagaag
gatgataagtttgacttcaagaagatagttagtgaaaactggattgaaccaccaaagaga
gagcggaagcggaattactcagaatcagaatactttaagcaaacaatgcgccaaggtgct
ccagtaaaacccaaagagcctcgaattccacgcatgcctcagttacatgattttcaattt
ttcaacacacaaaggctgagtgagctgtatgaaaaggaagtacgctacctcatgcaaaat
catcagaagaatcagttgaaggacacaactatagaagtggatgaaccagaagaagttgga
gatccattgactgctgaagaactggaagaaaaggaacgtctattagaagagggattctct
tcttggagtagaagagatttcaataccttcatcagggcctgtgagaagtatgggcgaagt
gatatacaaagcattgttgccgagatggaggggaaaacagaggaggaagtagaaagatat
gcaaaggttttcaaagagagatacaaggaattaaatgattatgataggatcatcaagaac
attgaaagaggagaggctcgaatttctcgcaaggatgagataatgaaagctattgggaaa
aagttggatcgctacaagaatccatggctagaactgaagatctcatatggtcagaacaag
gggaagttgtacaatgaagaatgtgaccgtttcatgatatgcatggttcacaagcttggg
tatggcaactgggatgagttgaaagcagcatttcgcacgtcacccttgtttcggtttgat
tggtttgtgaagtcacgcacaactcaggaacttgcgaggagatgtgatacactaattcga
ttggtggagaaagagaaccaagaagttgatgagagggagagacaggctcgcaaagagaag
aagcttgctaagaacatgacaccatcaaagcgtggcacgggtaggcagccaactgagagc
ccctcttccatgaagaagaggaagcaattaactatggatgattatgttagcacgggaaag
aggaggaggtaa
DBGET
integrated database retrieval system
