Fragaria vesca (woodland strawberry): 101297150
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Entry
101297150 CDS
T02666
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6 homolog
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101297150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fve03009
]
101297150
Ribosome biogenesis [BR:
fve03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
101297150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U3_assoc_6
UTP6_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
Suf
TPR_1
Motif
Other DBs
NCBI-GeneID:
101297150
NCBI-ProteinID:
XP_004299976
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Position
LG5:complement(16895737..16900113)
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AA seq
655 aa
AA seq
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MADVVQYRLERMTNELNDLEQRGIFTRREISEIVKKRTKFEYRLKRPSPLKQDYLSYIDY
ETQLDSLRRLRKKSVTRELQKQGLKTTKKMKKSVSDFAGIMRILDIYRLAVMRFKGDIEL
WFRYLEFCRQKRNGRMKKVLADVIKFHPKVPGVWIYAAAWEFDHNLNVEAARAIMQNGLR
VCTTSEDLWIEYLRMELTFLNKLKARKVALGEDEGTFTRDQISSDKKQWRDENKDLFMSL
NDKGENNEGSDDENEKSIKKISKFQEQGFSIIRTIYAGAVEALPSSFSLRKRFLEILEAT
DLVNSEEIHREILSDMKRDFSTEPGYWDWLARLEYNPGRKEYISEEGALSQIEKAIQFYE
EAIEVLPTATMLNQYAKFLNGVVTLPKLENKPSGISTPSDSYIPLLLRAYEKVKTMGYIE
EDLACQHISFLLQLGRLEEARKLADNLCSGIFSNSVKLWQLRISIGIRHLTRDSMSPSKA
ELLSIYELFQDVLTRVPISEAESLWLMALKFFANQKHYFGKLVEISIRSLTKDGGSEHGF
SLSAAIVNFVLQKDGLSHAREMYKRFIALPHPGLALSRACIELESNLASIGDRDSLVHAR
KLYESALQTYDQDLSLWRDYYLMETKMGTSETAFAVHWKARKILKDTTALVTPDL
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgtagtccagtatcgacttgagcgtatgaccaatgagctcaatgatctcgag
caacgtggaatttttacgcgcagagagatatctgagattgtcaagaagcgtaccaagttt
gagtaccggctcaaacgtccgagcccactcaagcaggattacctttcctatattgactat
gagactcagcttgactcactccgtcggctcagaaaaaaatcagtgacgcgtgagctgcaa
aagcagggcctcaagaccactaagaagatgaagaagtcagtttcagactttgccggaatc
atgaggattcttgatatttataggcttgcagtcatgaggtttaagggagatattgaactg
tggtttcggtaccttgagttttgtcgacaaaaaaggaatggtagaatgaagaaggtcctg
gctgatgtaatcaaatttcacccaaaggtccccggtgtctggatttatgctgcagcttgg
gaatttgaccataacttgaatgttgaagctgcccgtgctatcatgcagaacgggttaaga
gtttgcacaacatcagaagacctctggatagagtatcttcgaatggaactcacattcctc
aataaattaaaggctcggaaggttgcgcttggagaggatgagggtacttttacccgtgat
cagataagttcggataagaaacagtggagagatgaaaacaaagacttattcatgtccctc
aatgacaaaggagaaaataatgaagggtctgatgacgaaaatgaaaagtcaatcaagaaa
attagtaagtttcaagagcaaggttttagcataataagaaccatatacgctggagcagta
gaagctcttccctctagttttagtctgagaaaacgttttttggagatcctggaagctact
gacttggttaattcggaagaaatacatagggaaatactaagtgatatgaagagagacttc
tcaacagaaccagggtattgggattggcttgcaagactcgaatataatcctggaaggaag
gaatatatcagtgaagaaggcgcactttctcagatagaaaaagcaattcagttttatgag
gaggctatagaagttttacctacagctacgatgctaaaccagtatgcgaaatttttgaat
ggtgttgtcactcttccaaagttagaaaacaagccttctgggatatctactccatctgac
agttatattcctcttcttttgagggcttacgaaaaggttaaaacaatgggctatattgag
gaggatcttgcttgtcagcatatttcatttcttttgcaacttggaagactagaggaagcc
cgaaaactggcagataatctttgttctgggatattttcaaattcagtgaagttatggcag
ttaagaatctctatcggcatcagacacttaacaagggattccatgtcgccgagtaaagct
gagctactatccatctatgaactttttcaagatgttttgacaagagtgcccatttcagaa
gctgagagcctgtggttaatggcccttaaattctttgcaaatcaaaagcattattttggc
aagttggtggagatttctatcagatcattgacaaaagatggcggcagtgaacatggattt
tccctctctgctgctattgtgaattttgttcttcaaaaagatggactttcacatgctaga
gagatgtataaacgcttcattgctttaccacaccctgggcttgctctttctagagcatgc
attgaattggaatcaaaccttgcatccattggggatagagatagccttgtccatgcgagg
aaattatatgaatctgcacttcaaacgtatgaccaagatttgagcttatggcgagattac
tatctgatggagactaagatgggaacatcagaaacagcttttgctgtacattggaaagca
cgcaagattctaaaagacacaaccgctcttgttacaccagatttgtaa
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