Fragaria vesca (woodland strawberry): 101297210
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Entry
101297210 CDS
T02666
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101297210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101297210
03110 Chaperones and folding catalysts [BR:
fve03110
]
101297210
03029 Mitochondrial biogenesis [BR:
fve03029
]
101297210
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fve04147
]
101297210
Enzymes [BR:
fve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
101297210
Messenger RNA biogenesis [BR:
fve03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
101297210
Chaperones and folding catalysts [BR:
fve03110
]
Heat shock proteins
HSP60 / Chaperonin
101297210
Mitochondrial biogenesis [BR:
fve03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
101297210
Exosome [BR:
fve04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101297210
Exosomal proteins of other body fluids (saliva and urine)
101297210
Exosomal proteins of breast cancer cells
101297210
Exosomal proteins of colorectal cancer cells
101297210
Exosomal proteins of bladder cancer cells
101297210
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Permu_RdRp_thumb
Motif
Other DBs
NCBI-GeneID:
101297210
NCBI-ProteinID:
XP_004291571
LinkDB
All DBs
Position
LG2:26064281..26067817
Genome browser
AA seq
585 aa
AA seq
DB search
MASVNALTSASILCSPRQSLSRRVSQQQKNRSNYKQSRGRFAVKATAKDIAFDQDSRRAM
QAGIDKLADAVGLTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELPDAMENAGAALIREV
ASKTNDSAGDGTTTASILAREIIKLGLLSVTSGANPVSIKKGIDKTVQALVEELENKSRP
VKGRDDIKAVASISAGNDEQIGTMIADAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDR
GYISPQFVTNPEKLIVEFENARVLVTDQKISAIKDIIPLLEKTTQLRSPLLIIAEDVTGE
ALATLVVNKLRGILNVAAIKAPGFGERRKALLQDIAILTGAEFQANDLGMLIENTTVEQL
GLARKVTISKDSTTIIADQASKDELQTRIAQLKKELSETDSVYDSEKLAERIAKLSGGVA
VIKVGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAALVHLSTCVPAIKDKLEDAD
EKLGADIVQKALVAPAALIAQNAGIEGEVVVEKLKESEWEVGYNAMTDTYENLVDAGVID
PAKVTRCALQNAASVAGMVLTTQAIVVEKAKPKSPAAAAAQGLSV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgtcaacgctctcacctctgcttccattctctgctcgcccagacagagcttg
agtaggagggtaagtcagcagcaaaaaaacaggtcgaattacaagcaatccaggggaagg
tttgctgtgaaggccactgccaaagacattgcctttgaccaggactcgaggcgcgctatg
caagccggcattgataagcttgctgatgctgttgggcttactcttggtcctagagggaga
aatgttgtgttggatgagtacggtagccccaaagtggtgaatgatggagtgacaattgct
agagctattgagctacctgatgctatggaaaatgctggtgcagctctcattagggaggtt
gctagtaagaccaatgattctgctggtgacggcacaacaacagcatccattcttgcacgg
gagattatcaagcttgggcttttgagtgtcacctctggtgcaaatcccgtttcaataaag
aaggggattgataaaactgtacaggcgttggtggaggaactagagaacaagtctaggcct
gttaagggtcgtgatgatattaaagccgttgcatccatttctgctgggaatgatgagcaa
attggaacaatgattgctgatgctatagacaaagttggacctgatggtgttttgtccatt
gagtcatcatcctcatttgaaactactgttgaggtggaagaaggaatggagattgacaga
ggatatatctcccctcagtttgttacaaaccctgagaaattgattgttgagtttgaaaat
gcaagagtcttggttacagaccagaaaatttcagctatcaaggacataattcccttgtta
gaaaagactacacagttgagaagccctctgcttattattgctgaggatgtcactggggag
gctttggcgactcttgttgtcaacaagttgaggggtatacttaatgtggctgccatcaaa
gctcctggttttggtgagcgtagaaaggctctccttcaagatattgctattttgacagga
gccgagtttcaagccaatgatcttggtatgttgattgagaacaccacagttgagcagctt
ggtttggccaggaaagtgacaatctcaaaggactccactaccatcattgctgatcaagct
tcaaaggatgagttgcaaactagaattgcacagttgaaaaaggaattgtctgaaacagat
tctgtatatgactccgagaaactcgctgagaggatagccaaactatctgggggagttgct
gttataaaggttggggctgctactgaaaccgaacttgaggaccgtaagctccgtattgag
gatgccaagaatgctacttttgctgccatagaggaagggattgttcctggtggcggtgct
gcattggtacatctttcaacatgtgtccctgcaatcaaggacaaacttgaagatgcagat
gagaagctaggggctgatattgtgcagaaggctctggtagcaccagcagcgttgatagct
caaaatgctggaattgaaggggaagtggtggtagagaaactaaaagagagtgaatgggag
gttggctacaacgcaatgacagacacatatgagaacttggtggatgctggtgttatcgac
cctgcaaaggttacaagatgtgctttgcagaatgctgcttcagttgcaggaatggtcttg
accactcaggctattgtggtagagaaggctaagcccaagtcacctgctgctgctgcggca
caaggactttccgtgtaa
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