Fragaria vesca (woodland strawberry): 101297226
Help
Entry
101297226 CDS
T02666
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03013
Nucleocytoplasmic transport
fve03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101297226
03015 mRNA surveillance pathway
101297226
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fve03019
]
101297226
03041 Spliceosome [BR:
fve03041
]
101297226
Messenger RNA biogenesis [BR:
fve03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101297226
Spliceosome [BR:
fve03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
101297226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
101297226
NCBI-ProteinID:
XP_011461330
LinkDB
All DBs
Position
LG3:19040343..19045466
Genome browser
AA seq
855 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQAKLMKSQKFAPELEHLVDMTKVNMDVMRPWIATRVTELL
GFEDEVLINFIYGLLDVKEANGKEIQISLTGFMEKNTVKFMKELWTHLLSAQNNASGVPQ
QFLDAKQEEARKKKEEADAIETQRKKDKEVLELERSKKMEGGVDKKPSNGEAGPSSYRVS
PRASSDRPDDERGTGNRNGVTARNRVSRSPLPPIDSADSDSSLSPRFGERDGSSSVSKSP
EARGRSISSERGRGYRSPQRRPISSRRRSPEGSLSPRGRSPHSRRGSRSNSPHRSRSPVL
RRVRSPYQRRSRSPGRRRSPPPFRSRRSPSPFRGRRSPYRRRRSPSPLRRRRPSPVRNRR
SPSPIRRRRSPSPLRRRLSPIGRRRRSPSPARRRSPSPVRPSYRRSSRNRYASPVRRRSP
VRSGRRSPPLRRRSPSPSDRSSSSPVQRDSPSPVKRTTTQKRSPLQSHQERTRSVENLSP
ASQQSSGSEGSLQRESKNGNNYHKRVPALSPSPQKSPLNLEPSPGARSLREKRRRLSSPS
ESPAKRPKEQIARYGSSSPSRKPREQKLRRDSPKECEEEDDADHRPKSLERRSRDTSGIS
KQIISPAKIPNKEEYSPERVVSGQRFTESQSHLDKIESRNQEQEMKSGKSSGRGSNMPIV
YKDSLPGETQRASNPGEGKKADDKNRSHSKNTKDSERHRKPGSLHSSVEMVDHSNHSGGL
DSGSEDSDKGRSGDKEKRKNKRSEKQEVTSDDDDSYDSAIEDRKEAKKRRKEEKRLRKEK
KRRRREERRRRREERRAEKQKVKNSSDASGSDGEHVTGRGFHSSDNEEEAVQKKLEIELR
KKALESLKAKKGISQ
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcgggttcttcaggggtacgtcggctgatcaggacacgaggttttccaacaag
caagccaagctgatgaaatcgcagaaattcgcaccggaattggaacatctggtggacatg
acgaaggtgaacatggatgttatgcgtccatggattgctacccgggtaactgagcttctc
gggtttgaagatgaagttcttatcaacttcatttatggtcttttagatgtcaaggaagcg
aatggaaaggagattcaaatttcgctgactggatttatggagaaaaatacagttaagttt
atgaaagagctctggactcatcttctcagtgcacaaaataatgccagtggtgtccctcaa
cagttcttggatgccaaacaagaagaagcacgaaaaaagaaggaggaggcagatgcaatt
gaaactcagagaaagaaagataaggaggtgcttgaactagagagatcaaagaagatggaa
ggaggggttgataagaaaccaagcaatggtgaggcggggccaagttcataccgtgtgtcc
ccaagggcttcaagtgaccgtcctgatgatgagagagggactggcaacaggaatggtgtg
acagcaaggaacagggtttctagatctccactgcctccgatagattcagcagattcggac
tcatctttgtcccctcggtttggtgaaagagacggatcaagcagcgtatctaagtcacca
gaagcacggggacggtccatttcttccgaaaggggaaggggttatcgctctccacaaaga
cgaccgatttcatctaggaggcggtcacctgagggatcactttccccaagaggaagatca
cctcattccaggagaggatcacgatcaaattcaccgcacagatcacgctctcctgtattg
cgtcgagttcgttctccctatcagcgtagatcacgttctcctggacgtcgcaggtcacct
ccacctttccgaagccgcagatcaccctcaccttttcgaggccgtagatcaccctatcgg
cgccgaagatcaccctcacctctccgccgccgcagaccctcacctgttcgtaatcgcaga
tcaccatcacctatccggcgtcgcaggtcaccctcccctctgcggcgacggttgtcacct
attggacggcgtcgcaggtccccctcacccgcacgtcgtaggtcaccctcacctgttcga
ccatcgtatcgaagatcatcacggaacaggtatgcatctccagtgcgacggaggtcacca
gttcggagtggcaggaggtccccacctcttcgacgtaggtctccttcgccttctgatcga
agttcttcatctcctgttcagcgtgattccccttcaccagtcaagagaacaacaacgcag
aagagatctcccctgcaatcccaccaagaaagaacaaggtctgttgagaacttgtcccca
gcttcacaacaatcctctggttccgaagggtcactgcagagggaatcgaagaatgggaat
aattaccacaaaagagttccagctttgtcgccatcaccacagaagtctcctctaaattta
gaaccttcaccaggtgcaaggagtttgagggaaaagaggagaagattgtccagtccatct
gaaagtcctgcgaaacgaccaaaggagcaaattgctcgttatggtagctcaagtccttca
aggaaaccaagagaacaaaaacttcgacgtgacagtcccaaagaatgtgaagaagaggat
gatgctgatcacagacccaagtccttggagagaagatccagagatacatcagggatcagt
aagcagataatttctcctgctaagattcctaacaaggaagagtactctcctgaaagagta
gtatctggtcaaaggtttactgaatctcaaagccatttggataagattgaaagcagaaac
caagagcaggagatgaagagtggaaaatcttctgggaggggttcaaacatgccaattgtc
tataaagactctctgccaggtgagacacaaagggcatcaaatcctggtgaagggaaaaaa
gctgatgataagaaccgctctcattcaaagaataccaaggatagcgaacgacatcgtaaa
cctggatctttacactcatctgttgaaatggttgatcatagtaaccatagtggtggtttg
gattctggttctgaggacagtgacaaaggcagaagcggagacaaggaaaagagaaagaat
aagagatcagagaagcaagaagtgacttcagatgatgatgacagttatgattctgcaata
gaagacaggaaggaggctaaaaagaggaggaaagaggaaaagaggttgcggaaggagaag
aagcgccggaggcgtgaggagcgtcgacgcagaagagaagaacgtcgtgccgagaaacag
aaagtgaagaactccagtgatgcttctggttcagatggtgaacatgtgaccggaaggggg
tttcattcaagtgacaatgaagaagaggctgttcagaagaaacttgagattgaattgcgc
aagaaggctctcgaatcactcaaagcaaagaagggcatcagtcaataa
DBGET
integrated database retrieval system
