Fragaria vesca (woodland strawberry): 101297342
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Entry
101297342 CDS
T02666
Name
(RefSeq) probable methionine--tRNA ligase
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00450
Selenocompound metabolism
fve00970
Aminoacyl-tRNA biosynthesis
fve01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
101297342
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
101297342
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fve01007
]
101297342
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fve03016
]
101297342
Enzymes [BR:
fve01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
101297342
Amino acid related enzymes [BR:
fve01007
]
Aminoacyl-tRNA synthetase
Class I (U)
101297342
Transfer RNA biogenesis [BR:
fve03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
101297342
Prokaryotic type
Other AARSs
101297342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
tRNA-synt_1e
Anticodon_1
CoV_peptidase
Motif
Other DBs
NCBI-GeneID:
101297342
NCBI-ProteinID:
XP_004296962
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All DBs
Position
LG4:complement(13752212..13759428)
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AA seq
794 aa
AA seq
DB search
MGDLAAAPKLPIPGQRNVLITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNTVYI
CGTDEYGTATETKALEEKCSPQEICDKYHAIHKQVYEWFNISFDKFGRTSTPEQTEVCQG
IFNRLLENNWLSENTMQQLYCDTCTRFLADRLVEGTCPTQGCDYASARGDQCENCGKLLN
PTELKDPKCKVCKSTPRIRDTNHLFLELPLLKDRLKEYIDKMSVEGSWSQNAIQATNAWL
KEGLRQRCITRDLKWGVPVPHDNFRDKVFYVWFDAPIGYVSITKCYTPDWEKWWKNPEDV
ELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYEAGKFSKSKGIGVFGND
AKDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKLNSELLNNLGNFINRVLSFVAKPSG
QGYDSIVPDAPDAVSDPLTEKIGEKVGKCVEEYVEAMEKVKLKQGLKLAMSISSEGNAYL
QESQFWKLYKQDRPRCSVVMRTAVGLVHLLACLLEPFMPSFSVEVFKQLNLPAETHISLC
DDKGDIDRARKPWEIVPIGHKIGKPEPLFKELNDDEVDFLRKKFAGSQADRKEREEAEAV
KLAEQLKKSKLSDKTGKKKQQATKSATEAEISISRLDIRVGLITKAQKHPDADSLYVEEI
DVGEGQPRTVVSGLVKFIPLEEMQNRKVCVLCNLKPATMRGIKSQAMVLAASNSDHTAVE
LVDPPLSAQVGERITFPGFEGEPDDVLNPKKKVWETLQVDLQSNNELVACYKDIPLATSA
GVCTVKSIRGGAIR
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgggagacctcgctgccgctcccaagctccccatccccggccagcgcaacgtcctcatc
accagcgccttgccctacgtcaacaacgtccctcacctcggcaacatcatcggctgcgtc
ctcagcgccgacgtcttcgctcgctactgccgtctccgcggttacaacaccgtctacatc
tgcggcaccgatgagtacggcaccgccaccgagaccaaagccttggaggagaagtgtagc
ccgcaggagatctgcgacaaatatcatgcgattcataagcaggtgtatgaatggttcaat
ataagtttcgacaaattcggaagaacttcgacgccggagcagacggaggtttgccagggg
attttcaataggctgctggagaataactggctttcggagaacacaatgcagcagctgtac
tgtgatacatgtacacggtttttagccgacaggctcgtggaggggacgtgcccgactcag
ggttgtgattatgcttccgcaagaggagatcagtgtgagaactgtgggaagcttttgaac
cccacagaattgaaggatccaaagtgcaaggtttgtaagtcgactccacggattcgtgat
acaaaccatttgtttctggaacttcctttgctgaaggataggttgaaagaatatattgat
aaaatgtcagtggagggttcctggagccagaatgccattcaagcgacaaatgcatggctc
aaagaggggcttagacaacggtgtatcaccagagatctgaagtggggggttccagttcca
catgataacttcagggacaaggttttctatgtgtggtttgatgcgcctattggatatgtt
tcaattactaaatgctacactccggattgggagaaatggtggaagaatccagaggatgtg
gagttgtatcagtttatgggcaaagataatgtgccattccacacggtgatgtttccttcc
acgcttcttggaactggtgaaaattggactttgatgaagacaataagtgttactgaatac
ttgaactatgaagcaggaaaattttctaagagcaagggtatcggagtatttggaaacgat
gccaaagatacaaacattcctgttgaagtatggcgatattacttgctaaccaataggccc
gaggtgtcagacacattatttacatgggcggatctgcaagcgaaactcaacagtgaatta
ctgaataatttgggcaacttcattaaccgagttttgagttttgttgccaaaccttcaggt
caaggatatgactccattgttcctgatgctccagatgcagtctctgatcctttgacagag
aaaataggtgaaaaagtgggtaaatgtgtggaggaatacgtagaggccatggaaaaggta
aaactaaagcaaggactcaaactagccatgagcatttcgagcgaagggaatgcatatctg
caagaaagtcagttctggaaactttacaagcaagaccgacctcgctgctccgttgttatg
agaactgcagtggggctggtgcatcttcttgcctgcctattggagcctttcatgccatcg
ttttctgttgaggtatttaagcagcttaatttgcctgctgagacgcacatatcactttgt
gatgataaaggcgatattgatagggcaagaaagccttgggaaattgtaccaataggtcac
aagattgggaaaccagagccgttgttcaaggaattgaatgatgatgaagtagattttcta
aggaagaagtttgctggaagtcaggctgatagaaaggaaagggaagaagccgaagcagtg
aagttggctgagcaacttaagaaatcgaaactttcagacaagactggaaagaagaaacaa
caagcaacaaaatctgcaactgaagcagagatttccatatctagactagatattcgtgtc
ggccttattacaaaagctcagaaacatcctgatgctgattcactttatgtagaagagatt
gatgttggcgaaggacagcccagaacagttgtcagtggactagtcaagtttatacctctt
gaggaaatgcagaatcgaaaggtatgcgtcctttgcaacctgaagccagcgaccatgcgg
ggtattaaatcacaagcaatggttcttgctgcttcaaatagtgatcacaccgcagttgag
ttggttgatccaccactatctgctcaagttggggagagaattacattcccagggtttgaa
ggtgagcctgatgatgtgttgaaccccaagaagaaggtttgggagaccctgcaggtagat
ttgcagagtaacaatgagctagtcgcttgctataaagatattcccctcgctacatcagct
ggtgtttgcactgttaaatctattcgtggtggggcaattaggtag
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