Fragaria vesca (woodland strawberry): 101297438
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Entry
101297438 CDS
T02666
Name
(RefSeq) ALG-2 interacting protein X
KO
K12200
programmed cell death 6-interacting protein
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03250
Viral life cycle - HIV-1
fve03272
Virion - Hepatitis viruses
fve04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
101297438
03272 Virion - Hepatitis viruses
101297438
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101297438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fve04131
]
101297438
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fve04147
]
101297438
Membrane trafficking [BR:
fve04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
101297438
Exosome [BR:
fve04147
]
Exosomal proteins
Proteins found in most exosomes
101297438
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
zf-C4H2
ZapD
Zwilch
Dsl1_C
CAP_N
Motif
Other DBs
NCBI-GeneID:
101297438
NCBI-ProteinID:
XP_004299011
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All DBs
Position
LG5:complement(3730215..3735611)
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AA seq
874 aa
AA seq
DB search
MTSTPSSSATTNVMLAIFEKKTTQIDLYRPLRNYIAFHYSEREAQNLEDDLQTLKQLRSD
LERTPDPSLPARRDLLQNYYKALCLVETRFPISPDKDHINSVTFVWHDAFKNKQKASQQN
IHLEKAAVLFNLGAVYSQIGLSYDRATVDGRRLASHAFIAAAGAFAFLRDNAATKASIGS
STTVDLSVECAGMLERLMLAQAQESVFENTIAKGSTPGVCAKISRQVGLYYEEALAAANS
PTLNQHFDKAWVSHMQLKAALFFAEACYRYGLELHEKEEIAEEIARLKSGISALAESKKS
TRGAAQQILDAISKLEANLNRNLERAMKENDRVYLMRVPSVSSLPPLPAFAMVKPMAMSE
VLDASKEKMFASLVPDSSAKALSRYTEMVDDIIRTQAEKLQQASELTRVRLKEMDLPESI
LALEGNFTLPTDLKEDVEAVQISGGPAGLEAELQQLRDLRRVNQEILVHIDELLQKEARE
DSQFRSQFGTRWTRPQSSTLTKNLQDRLSRFAANLKQASDSDARIERSVREHSALMSILD
RHPIESALPTLARPIMSLDANEDAILGALKQSLRQLETLGAQRAGLEDMLKEMKRKDDIL
PKLMTSTGSYEDLFRKEISKYDLISEDIGHNIEAQEQLLLQIQAQNDEFAAVFNLEDYKA
SREKCYKQIQAAIGKYREIKDNINEGLKFYVTLQDAITNVKQQCSDFVMTRNIQCQEMIE
DVHKQMAGLNFQDSKNSAAYNYPSAGSQSQRSGPQQQTDPRPQTSYYRPPEQPGYSQPPP
YSTQQMPPPYHAPPQAGSPYPPHQAGSPYPPPQAGSPYPPPQQQPPASHEYGQPAYPGWR
GPYYNAQQSGSHPRPPYTIPPQYPPNQSGYYKPQ
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgacgccgtcctcctccgccaccaccaacgtcatgctggccatcttcgagaag
aagaccacccaaatcgacctctaccgccccctccgcaactacatcgccttccactactcc
gagcgcgaagcccagaacctcgaggacgacctccaaaccctaaaacagctccgctccgac
ttggagcgcacacccgacccgtccctcccggcccgccgcgacctcctccaaaattactac
aaagccctctgcctcgtcgagactcgcttccctatctcgccggacaaggaccacatcaac
tccgtcaccttcgtctggcacgacgccttcaagaacaagcagaaggcctcgcagcagaac
atccacctcgagaaggccgccgtgctcttcaatctcggcgccgtctacagccagattggc
ctgtcctacgatcgcgccaccgtcgacggaaggcgcctggcgtctcacgcgttcatcgcc
gcggccggcgcgttcgcgtttctgagggacaatgcggcgaccaaggcctcgatcggaagc
tccacgacggtggatttgtcggtggagtgcgccgggatgctggagaggctgatgctggct
caggcgcaggagagcgtctttgagaataccatagccaaaggtagcacgcctggtgtttgc
gccaagatctccaggcaggttggattgtactacgaggaagctttagcggcagcaaattct
cccactttgaaccagcattttgacaaggcttgggtatcacacatgcagttaaaggctgct
ctctttttcgcagaagcttgctataggtatggtctggagctacatgagaaagaagagatt
gcagaagagattgcacggttaaagagtgggataagtgctctagcggagtctaagaaatca
actaggggggcagctcaacaaattttggatgcaattagcaagttagaggccaaccttaac
cgtaaccttgagagggctatgaaggagaatgatagagtttacctcatgagggttccttct
gttagctccttaccaccactgccagcatttgccatggtgaagcctatggcgatgagtgag
gtcttggatgcaagcaaggagaagatgtttgctagtcttgttccggacagtagtgcaaaa
gctctttcaaggtacaccgaaatggtcgatgatattatcaggacacaagctgaaaaattg
caacaagccagtgagctgactagagtaaggctcaaggaaatggaccttccagagtctatt
cttgctttggaaggaaattttactcttcctacggatcttaaagaagatgtggaggcagtg
cagattagtgggggccctgctggtttggaagctgagctgcagcaacttagggatttgaga
agagtgaaccaggaaattttggtacacattgatgagctcttgcagaaagaagccagagaa
gattcccagtttagaagccaatttggaacacggtggacaaggcctcagtcaagcactctt
actaagaacttacaggataggctaagtaggtttgcagctaacttgaagcaagcttcagac
agtgatgctcggattgagcgctcagtcagagaacattcagctctcatgtccatccttgat
cgtcacccgattgaatctgccctcccaactctggctaggccgatcatgtctttggatgcc
aatgaagatgctatattaggggccctgaagcaaagcttgcggcaattggaaacgcttggt
gctcaacgagcaggccttgaagacatgctcaaagagatgaaaagaaaggatgacatactt
cctaagttgatgacatcaactggctcctatgaggatcttttcaggaaggagatatcaaaa
tatgatcttataagtgaagatattggccacaatattgaggcacaagaacaattattgctg
caaatccaggcccaaaatgatgagtttgctgcagtcttcaatcttgaagattacaaagca
tctcgtgagaaatgttacaagcagattcaagctgccataggaaagtaccgtgagattaag
gataacataaacgagggtttgaagttttatgttactcttcaggatgcaataactaatgta
aagcagcagtgcagtgactttgtgatgactagaaatatccagtgccaggaaatgattgaa
gatgtgcacaaacagatggcaggtctcaatttccaggattctaaaaactcagctgcgtac
aactatccttctgcgggaagtcaaagtcaaagatctggtccacaacagcaaactgatcca
cgtcctcaaacatcctactaccgaccacctgagcagccaggttattctcagcctcccccc
tactcaacgcagcagatgcctcctccgtaccatgcacctcctcaggctggtagtccatac
cctccccatcaagctggtagtccatacccaccccctcaagctggtagtccatacccacct
ccacagcaacagccccctgcaagccatgaatatggtcaacctgcttatccagggtggcgg
ggtccatactacaacgcacaacaatctggatcgcatccgcgacctccttacaccatccca
cctcaataccctccaaaccagagtggctactataaaccacaatag
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