Fragaria vesca (woodland strawberry): 101297463
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Entry
101297463 CDS
T02666
Name
(RefSeq) vacuolar protein sorting-associated protein 53 A
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
fve04131
]
101297463
Membrane trafficking [BR:
fve04131
]
Protein recycling
Others
EARP complex
101297463
Endosome - Golgi transport
Tethering complex
GARP complex
101297463
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
RINT1_TIP1
COG7
Vps54_N
COG4_N
XhlA
Mo25
MPH2
DUF401
Motif
Other DBs
NCBI-GeneID:
101297463
NCBI-ProteinID:
XP_004303916
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All DBs
Position
LG6:complement(27508527..27518004)
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AA seq
819 aa
AA seq
DB search
MDKSSALEYINQMFPTEASLSGVEPLMQKIHSEIRRVDAGILAAVRQQSNSGTKAKEDLA
AATRAVKELMYKIREIKTKAEQSETMVQEICRDIKKLDFAKKHITTTITALHRLTMLVSA
VEQLQVMASKRQYKEAAAQLEAVNQLCSHFEAYRDVPKITELREKFKNIKQILKSHVFSD
FSSLGTGKESEESNLLQQLSEACLVVDALEASVREELVNNFCSRELTSYEQIFEGAELAK
LDKTERRYAWIKRRMRTNEEIWTIFPSSWHVSYRLCIQFCKKTRKQLEDILNYQKEKPDV
GTLLLALQRTLEFEDELAEKFGGGTRGREVANEIEEIGRENTTQNASDIRKKYEKKFAAH
QGNATEEKDKELSVPGAGFNFRGIISSCFEPHLTVYTELEEKTLMENLEKLVQEETWDVE
EGSQSSVLSSSMQLFLIIKRSLKRCSALTKNQTLFNLFKVFQRVLKAYATKLFARLPKGG
TGIVAAATGMDGQIKTSDRDERVICYIVNSAEYCTNTSGELAESVSKIIDSQLADGVDMS
EVQDEFSAVITRALVTLVQGLETKFDNEMAAMTRVPWGTLESVGDQSEYVNGINMILASS
IPILGSLLSPIYFQFFLDKLASSLGPRFYANIFKCKQISETGAQQMLLDTQAVKTILLDI
PSLGHQTSRAASYAKFVSREMSKAEALLKVILSPIDSVADTYRALLPEGTPMEFQRILEL
KGLKKADQQSILEDFNKHGPGITKPSAPPPVATPVPTAPTVSLIQNPTSVGFLAPREDVL
TRAAALGRGAATTGFKRFLALTEAAKDRKDGPFRKLFNA
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atggacaagtccagcgctctcgaatacatcaaccagatgttccccacagaggcgtcgttg
tccggcgtcgagccgctaatgcagaagattcacagtgagattcgccgcgttgatgccgga
attctagctgccgttcgtcaacagagcaattcagggaccaaggctaaggaggatcttgct
gccgcaacgcgagccgtgaaggaactcatgtataagatcagggaaatcaaaacgaaggct
gagcagagtgagactatggttcaggagatatgtcgcgacattaagaagttggactttgcg
aagaagcatataacgactaccatcactgcacttcatcgtctgacaatgcttgtctctgct
gttgaacagcttcaagtgatggcttccaaacgacaatataaagaggcagctgcacagttg
gaggctgtgaaccagctatgtagccattttgaagcctatagggatgttccgaaaataaca
gaactcagggagaaatttaagaatatcaaacaaatattaaagtcacacgtgttttccgat
ttctcaagcttaggtaccggaaaggaatcagaggaaagtaacttactccagcagctatct
gaggcttgcttggttgttgatgcattagaggcatctgtgagggaagaattagtaaataac
ttttgcagcagggagcttacttcttatgagcagatatttgaaggagctgaattagcgaag
ttggataagactgaacgacgatatgcatggatcaagcgccgcatgagaacgaatgaagaa
atctggacaatctttccttcttcatggcatgtatcttatcgactctgcattcagttctgc
aaaaaaacaaggaagcagcttgaagatatccttaattatcagaaagaaaagccagatgtt
gggacattactgttggcactacagcgaactcttgaatttgaggatgaattggcagaaaaa
ttcggaggtggtactcgaggcagggaggttgcaaatgagattgaagaaattggtagagaa
aatactactcaaaatgcttcagatattcgaaagaaatatgaaaagaagtttgctgcccat
caaggaaatgccacagaggaaaaggataaagagttatcggtgcctggagctgggttcaac
ttccgtggaatcatctcatcttgctttgagcctcacttgactgtttacacagaactagaa
gagaagacattaatggagaatttggagaaacttgttcaggaggaaacatgggatgttgag
gagggaagtcagagtagtgttttgtcaagtagcatgcagttgtttcttattatcaagaga
agcttaaagcgatgcagtgctttaacaaagaaccagacattatttaacttgttcaaggtg
tttcaaagggttctcaaagcatatgcaacaaagctgtttgctagattacctaaagggggt
acaggaattgttgcagcagcgactggtatggatggacagataaagacatcagacagagat
gaaagggtgatctgttatattgtcaattcagctgaatattgcactaacacgtctggtgaa
ctcgctgagagtgtgtccaaaataatcgattctcaattggcagatggggtggatatgtcg
gaagtgcaggatgaattttcagcagttataacaagagcattggtaaccttggtgcaaggc
ctagaaaccaagtttgacaatgaaatggctgcaatgacacgagttccatggggtacactt
gagagtgttggtgaccaatcagaatatgttaatggcataaatatgatccttgctagtagt
atacctatacttggaagccttctttcaccgatctacttccagttcttcttggacaagctg
gcatcatctcttggtccacgtttctatgctaacattttcaagtgcaagcaaatatcagag
actggagctcaacaaatgctattggatactcaagctgtaaagactattcttttggacatc
ccatcacttggtcaccagacttctcgtgctgcaagctatgcgaaatttgtaagccgtgag
atgagcaaagctgaagcacttctaaaggtcatactgtccccaattgattctgtcgcagat
acatatcgtgcattgctaccagagggaacacctatggagtttcagcgaattctggaactc
aagggtcttaaaaaggcagatcagcagagtatacttgaagactttaacaagcatggccca
ggaatcacaaaaccttctgccccacccccggttgcgacacctgtcccaactgccccgaca
gtctctctgatacaaaatcccacttcagttggattccttgcacccagagaagatgtacta
accagagcagctgcacttggacgtggtgcagccacaacagggttcaagagattcctagct
ttaacagaagctgcgaaagaccggaaagatgggcctttcaggaagctcttcaatgcttga
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