Fragaria vesca (woodland strawberry): 101297538 Help Entry 101297538         CDS       T02666                                  Name (RefSeq) protein tipD   KO K17890   autophagy-related protein 16-1 Organism fve  Fragaria vesca (woodland strawberry) Pathway fve04136   Autophagy - other Brite KEGG Orthology (KO) [BR:fve00001]  09140 Cellular Processes   09141 Transport and catabolism    04136 Autophagy - other     101297538  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:fve04131]     101297538    03029 Mitochondrial biogenesis [BR:fve03029]     101297538 Membrane trafficking [BR:fve04131]  Autophagy   Autophagosome formation proteins    Atg12 conjugation proteins     101297538  Others   Specific organelles associated proteins    Auto phagosome     101297538 Mitochondrial biogenesis [BR:fve03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     101297538 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40 WD40_CDC20-Fz WD40_Gbeta WD40_WDHD1_1st Beta-prop_WDR3_2nd EIF3I Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR41 WDR90_beta-prop_4th Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_VPS8 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st ATG16 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N WDR54 Beta-prop_Aladin NBCH_WD40 Beta-prop_HPS5 Beta-prop_IFT122_1st Beta-prop_ACSF4 Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_SPT8 Beta-prop_NWD2_C Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_NUP159_NUP214 eIF2A Beta-prop_Vps41 Ge1_WD40 Cytochrom_D1 PEP5_VPS11_N Beta-prop_WDR75_2nd PQQ_2 Beta-prop_RIG_1st Beta-prop_WDR11_1st Motif Other DBs NCBI-GeneID:  101297538 NCBI-ProteinID:  XP_004299173 LinkDB All DBs Position LG5:complement(6050459..6053174) Genome browser AA seq 509 aa AA seqDB search MSLEEVARRAIKHALQALRQRHLLEEGAHAPAYIALAKPIAQQGSEWKDKAETLELELQQ CYKAQSRLSEQLVVEVAETRSSKALLLEKEAVIEDQQKELTERRDECSQLKAELEKKIEA LELVMSENNEIRAQLEEMSVRAKTAEAENKVLIDRWMLEKMRDAERLNEANALYEDMLER IRASGLQKLAMQQVDGVVRQSEEGAEYFVESTNPSTCKNRINAHDGGCASILFEYNSGKL ISGGQDGTIKTWDTSTGALANTLHGCIGSVLDLTITHDNRSIIAASSSNKLYVWDANSGR VRHTLTGHTDKVCAVDVSKFSSRHIVSAAYDRTIKVWDLQKGYCTNTIIFPKHCNALGFS MDGQTICSGHVDGNLRLWDIQKGKLLNEVAAHSNAVTSISLSRSGNMILTSGRDNVHHLF DMRTLEVCGTLRATGNRVASNWSRSCISPDDSYVAAGSADGAVYIWSIAKADIVSTLKEH TNSVLCCSWSGHGKPLASADKNGVICTWT NT seq 1530 nt NT seq  +upstreamnt  +downstreamnt atgtcgctggaggaggtagctaggagagcgataaagcacgcgctccaggctctgcggcag cggcatttgctcgaagaaggcgctcatgctccggcctacatcgctctcgccaagccgatt gctcaacagggctcggaatggaaggataaggcggagactttggagctggagcttcagcag tgctataaggctcagtctcggctgtcggagcagcttgtggtggaagtagcagagaccagg tcttcgaaggctttactcttggagaaagaagcagtgattgaggatcagcagaaggagctg actgaaaggagggatgagtgctctcagttgaaggctgagttggaaaagaagattgaggct ctagagttggttatgagtgagaacaatgaaatacgagcgcagctggaagaaatgtctgtt agagctaagactgctgaggctgaaaataaggtgttaattgaccgctggatgttggaaaag atgagggatgctgaacgcctaaatgaggcaaatgctctatatgaagatatgcttgagcgg atcagggccagtggtttgcaaaaacttgccatgcagcaagtagatggtgtggtgcgccaa agtgaagaaggtgctgagtactttgtggaatcaaccaatccatccacatgcaagaacagg atcaatgcccatgatggcggctgtgcttcgatattattcgagtacaattcaggcaaattg atctctggaggacaggatgggacaattaaaacgtgggatacaagtacaggagctttggct aatacacttcatggttgcattggttctgttcttgatcttaccattacccatgataataga tctatcatcgctgcaagcagttcaaacaaattgtatgtctgggatgctaactcggggagg gttcgccatactctcacgggtcacacggataaagtgtgtgctgtagatgtcagcaagttc tcaagtcgtcacattgtaagtgcagcttatgatcgtaccataaaagtttgggatttgcag aaaggctactgcaccaacacaatcatcttccccaaacactgcaatgctctcggcttcagt atggatggacagactatttgctcaggtcatgttgatggaaatcttcggttgtgggatatt caaaaaggaaagctgctcaatgaagtggctgcacactccaatgctgttacatctatatct ttgtcacgaagcggcaacatgatattgaccagtgggagggacaatgtgcatcaccttttc gatatgagaacccttgaagtttgtgggacattgagagccaccgggaacagagtagcatct aattggagccgatcttgtatcagtccagatgacagttacgtcgcagctggatctgccgat ggtgctgtttatatttggtctatagccaaagctgacatcgtcagcactctgaaggaacac accaactctgtcctctgctgctcatggagcgggcatggaaaaccactagcttctgcggac aagaatggagtaatttgtacttggacgtga

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