Fragaria vesca (woodland strawberry): 101297591
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Entry
101297591 CDS
T02666
Name
(RefSeq) DNA gyrase subunit A, chloroplastic/mitochondrial
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fve03032
]
101297591
03400 DNA repair and recombination proteins [BR:
fve03400
]
101297591
Enzymes [BR:
fve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
101297591
DNA replication proteins [BR:
fve03032
]
Prokaryotic type
DNA Topoisomerases
101297591
DNA repair and recombination proteins [BR:
fve03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
101297591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-GeneID:
101297591
NCBI-ProteinID:
XP_004308178
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Position
LG7:complement(194681..209397)
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AA seq
954 aa
AA seq
DB search
MKSSASAITPTPTPTMALASGLRLSSTFLRCRLPAPLNPTRFSALRHSLFDLRFLSASSS
SRTRTRTRLRPRPIKATPSEDGGLLEGAGEGQNGNGSVLVKDSDERIVRVELHKEATDAY
MAYAMSVLLGRALPDIRDGLKPVHRRILYAMHELRLSSRKPFVKCARVVGEVLGKFHPHG
DTAVYDSLVRMAQDFSLRSPLINGHGNFGSIDADPAAAMRYTECRLEALTEAMLLSDLEQ
DTVDFVPNFDNSQKEPSLLPARVPNLLLNGSSGIAVGMATNIPPHNLGELVDVLSVLIHN
PEATLQELLEYMPGPDFPTGGLIMGNLGILEAYRTGRGRIVVRGKTDIESLDSKGKRSAI
IIKEIPYQTNKAALVEKIAQLVENKILDGISDIRDESDRTGMRVVIELKRGSDPSIVLNN
LYRLTSLQSSFSCNMVGILNGQPKLMGLKELLQAFLDFRCSVIERRAKFKLSQAQDRRHI
VEGIAVGLDNLQRVMRISLEASNNTIASSLLRNEFNLSEKQAEAILDFNFRRLNVLERKK
FDNESESLKEQISKLEELLSSKKRILQVVEQEAIDIKNKFANPRRSMLEDSDGGQLDDID
VIPNDEMLLAFSEKGYVKRMKPNTFNLQNRGTIGKSVGKLRVNDAMSDFIVCHAHDHVLF
FSDKGTVYSARAYKIPECSRTAAGTPLVQILSLSDGERITSVIPVSEFAGDQFLLMLTVN
GYIKKVSLSSFSSIRSTGIIAIQLVPGDELKWVRCCTNDDLVAMASLNGMVILCSSDIIR
ALGRNTRGSVAMRLKEGDKMASVDIIPAAMWKDLKRVSEAPESTARSLDGPWLLFVSESG
YGKRVPLSRFHSSRLNRVGLIGYKFSSEDRLAAVFVVGFSLAEDGESDEQVVLVSQSGTV
NRIKVRDISIQSRYARGVILMRLDLAGKIQSASLMSATDEEPENEVDAEAVIHG
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcctcagcctcggccataaccccaaccccaacccccaccatggccttagcctcc
ggtctccgcctctcttccactttcctccgttgccgcctccccgcaccgctcaacccgacc
cgcttctccgccctccgccactccctcttcgacctccggttcctctctgcttcctcctcc
tctcgtactcgtactcggacccggctccgcccccgccccatcaaagcgacgcccagcgaa
gacggcggcctcctcgaaggcgccggcgaggggcaaaatgggaatgggagcgtcctggtc
aaggactcggacgagcgaatcgttcgtgttgagctccacaaggaggccaccgatgcctac
atggcctatgctatgtccgtgctgctcggccgtgccctgccggacattcgcgacggtctc
aagccggtccaccgccgtattttgtatgcaatgcatgaattgaggctttcgtcgcgaaaa
ccgtttgtgaaatgtgctagagttgtgggggaggttctaggaaaattccatcctcatggt
gacactgctgtgtatgattccttggtgcgaatggctcaggatttctccttacgatcacca
ctgattaacgggcatgggaattttggttcaattgatgctgatcctgcagctgccatgcgt
tacacagagtgcagattggaggcgctgactgaagcaatgttgctgtcagatttagaacag
gatacggttgactttgtaccaaactttgataattcacaaaaagagccatcacttttacct
gctcgggttccaaatttattattaaatggttcttctgggattgcggttggcatggcaaca
aatatccctccgcataatcttggggagttggtggatgttcttagtgtgttgattcataat
ccagaagctacactgcaagaattgctagaatacatgccaggacctgattttccaactgga
ggactgattatgggaaaccttggtatcttagaggcatatcgaactgggagaggacgtata
gtggtcagaggaaaaactgatatagaatctcttgattctaaaggcaagcgaagtgcgatc
atcataaaggagatcccttaccaaactaacaaagcagctctggtggagaagatagcgcaa
cttgtagagaataagattttagatggcattagtgatattagggatgagagtgaccgcact
ggaatgcgtgtagtcattgagcttaagcgagggtctgacccatctattgttctcaataat
ctatatcgcctcacatcactccagtccagctttagctgtaacatggttggtatcctcaat
ggtcaacctaaactgatgggtctaaaggaattgctgcaggctttcctagatttcagatgc
tctgttattgagagacgtgctaaattcaaactttcacaagcacaggacagaagacatatt
gttgagggtatagctgtaggccttgataatctgcaaagagttatgcgtataagtttggaa
gcttctaataatacaattgcatcatctcttctaaggaatgagttcaacctttctgagaaa
caagctgaagcaatattagacttcaactttagaaggcttaatgttctggagaggaaaaag
tttgataatgaaagtgaatcattgaaagagcagatttcaaaactagaagaactgttgtca
agcaagaaacgtatattgcaggtggttgaacaagaagcgattgacataaaaaacaagttt
gctaatcccaggcgttcaatgctggaagactctgatggtggtcaacttgatgatattgat
gttattccgaatgacgaaatgcttttggccttcagtgaaaaagggtatgtcaagcggatg
aagcctaacacatttaatctgcaaaatcgaggaaccattggtaaatctgttggtaaattg
agggtaaacgatgcaatgtcagactttattgtttgtcatgcacatgatcatgttttgttc
ttcagtgataaaggaacggtctactcagctcgtgcgtataaaattcctgagtgcagccga
acagcagctggtacgccactggttcagatcttatctctgtcagatggcgagagaattact
tctgttattcctgtgagtgagtttgctggagatcagtttttactaatgcttacagtgaac
ggctacataaagaaggtgtctttgagctctttttcatcgatcaggtcaaccggaatcata
gcaattcaattggtccctggtgatgagctgaaatgggtccgttgctgcacaaatgatgat
cttgtagcaatggcatccctgaacggaatggttatcttatgttcctctgatattattcga
gctttaggcaggaacactcggggttctgtagccatgcgacttaaagaaggtgataagatg
gcaagcgtggacattataccagcagctatgtggaaagacttaaaaagggtgtcagaagca
ccagagagcacggctagaagtttggatggcccgtggttgttgtttgtgtctgagagtgga
tatggaaagcgtgttcccttgagcagatttcactcttcccgtctgaacagagtgggtctg
ataggttacaagttttcctcagaggaccgattggcagcagtttttgtggttggattctct
ctggcagaggatggtgaaagtgatgaacaagtggtcctagtaagccagagtggtacagta
aatagaattaaggtgcgagatatctcaatacagtctcgctatgcaaggggtgttattttg
atgcggcttgatcttgctggaaagattcagtctgcttcattaatgtcagcaacagatgag
gagccagagaatgaagtcgatgctgaagctgtgattcatggttga
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