Fragaria vesca (woodland strawberry): 101297768
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Entry
101297768 CDS
T02666
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
101297768
Enzymes [BR:
fve01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
101297768
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
BsuPI
Motif
Other DBs
NCBI-GeneID:
101297768
NCBI-ProteinID:
XP_004287405
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All DBs
Position
LG1:complement(4533096..4538400)
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AA seq
668 aa
AA seq
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MRIINLKKKVKLGLSLCCGKKVPIEQESQTMSGEGVRLHNQGRHVVMDNGIVQVTLSNPD
GIITGIRYNGIDNLLEPLNAEHNRGYWDLVWSGPGVKGTFDVIKGTDFRVIVENEELVEL
SFMRTWDPSLEGKCVPLNIDKRFVMLRGSSGIYSYAIYEHLKDWPDFEIGETRITFKLSK
DKFQYMAIADNRQRCMPLPDDRMSGRCQPLAFAEAVLLLDPKNKELAGEVDDKYQYSCMN
KDIQVHGWVCNDPPVGFWQITPSDEFRSGGPLKQSLTSHVGPTTLAIFLSSHYAGQDLNP
KFRGGEPWKKVFGPVFIYLNSAPIRDDPFFLWEDAKRQMMAEVQSWPYSFPASEDFQKSN
QRGNVSGRLLVLDRYVSEDITPANDAYVGLAPPGDVGSWQRECKDYQFWTRADNRGYFSI
KNIRSGTYNLYAWVPGYIGDYRCEAVININSGCFTEMGDLVHEPPRDGPTLWEIGIPDRS
AAEFYVPDPDPKYINKLYVNHPDRFRQYGLWSRYTELYPDADLVYTVGVSDYSKDWFFAQ
VPRQKDNTHEGTTWQIKFKLNIVHRNGTYKLRVAIASATLAEMQVRINDPNSRRPLFTTG
LIGRDNSIARHGIHGIYRLFNINVPGVQLVEGDNTIFLTQPRCTSPFQGLMYDYIRLEGP
PSCGSSSS
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcatcaatctgaaaaaaaaagtgaaactgggtctctcactttgttgtggcaag
aaagttccaatagaacaagagtctcagaccatgtcaggtgaaggagtgcggttgcataat
caagggcgccatgtggtgatggataatgggatagtccaagtcaccttgtcgaacccggat
ggtattatcaccggaatacgttataatgggattgacaatttgcttgaacctctcaatgcc
gaacataatagagggtattgggaccttgtttggagtggacctggagttaagggaacattt
gatgtgataaaaggtacagattttagggtcattgtggagaatgaggaactggttgagctt
tcgttcatgagaacatgggatccctcccttgaggggaaatgtgttcccttaaatatagac
aaaaggttcgtaatgcttcgtggttcctcgggcatctactcctatgcaatttatgagcac
ctgaaggattggcctgattttgaaattggtgaaaccagaataactttcaagctgagcaaa
gacaagtttcaatacatggctatagcagacaacaggcaaagatgcatgcccttacctgat
gaccggatgtcaggccgatgccaacccctggctttcgcggaagctgtcctacttctggat
cccaagaataaagagctggctggagaggtagatgacaagtaccagtactcatgcatgaac
aaagacattcaggttcatggttgggtatgcaacgacccaccagtcgggttttggcagatc
acacccagtgatgagttccgatctggtggacctttaaaacagagtctaacctcacatgtc
ggccccacaactcttgcaatatttcttagttctcattatgcgggacaagatctgaacccg
aaatttagaggtggtgagccatggaagaaggtttttggccctgtttttatctatctaaat
tccgcaccaattagagatgatccattctttctatgggaagatgctaaaagacagatgatg
gcagaagtccaaagctggccatatagtttcccagcttctgaggatttccaaaagtccaat
caacggggtaatgtgagtggtagactacttgtcttggacaggtatgttagtgaagacatt
acaccagcaaatgatgcttatgttggtttggccccaccaggagatgtaggatcatggcaa
cgagaatgcaaggactatcaattctggacgagggcagataacagaggttatttttcgatt
aaaaacatacgttctggcacttacaatctatatgcctgggtccctggttatattggagat
tacaggtgtgaagcagtcattaacatcaactcaggttgttttactgaaatgggtgatctt
gtgcatgaacctccaagagatgggcctacattgtgggaaataggcattcctgatcgttcc
gctgcagagttttatgttcctgatcctgatcccaagtatataaataagctttacgttaat
catcctgacaggttcagacagtacggtctgtggagcagatatactgaattatatcctgat
gcagatttggtttatactgttggtgttagtgattatagtaaagattggttctttgctcaa
gttcccaggcaaaaggacaacacacatgaaggaacaacatggcaaattaagttcaaactt
aacattgtccatcgcaacggcacctataaactgcgagtggcaatagcatctgcaactcta
gctgaaatgcaggttcgaattaacgatccaaactcaaggcgtcctctatttacgactgga
ctaatagggagagataactcaattgcaagacatgggattcatgggatctaccggctgttc
aacatcaatgtaccgggtgttcagcttgttgagggtgataatactatcttcctgacacaa
ccaagatgcaccagtcctttccaagggctgatgtatgactacatacgacttgaaggcccc
ccatcttgtggttcgagttcatcttaa
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