Fragaria vesca (woodland strawberry): 101297807
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Entry
101297807 CDS
T02666
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00040
Pentose and glucuronate interconversions
fve01100
Metabolic pathways
Module
fve_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101297807
Enzymes [BR:
fve01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
101297807
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
101297807
NCBI-ProteinID:
XP_011459190
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Position
LG2:24146823..24155870
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AA seq
403 aa
AA seq
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MERSSITFLFLVIALSSTFDIGYGQNGTFDVRDFGATGNGLNDDSRAFLDAWQRACGAVG
EIQTLNIPIGRKYMVKPVQFDGPCNSKNIVIQVDGSIEAPSTIGEWTGCELGSWLGFQNV
KGLTIKGAGVIDGKGSIWWRQKPQITNYTTGTNFAAPAALRFRYCDELALSGFTSLNSPN
KHIMIHGSNGVDISSVHVYAPEYSPNTDGIVLYGSMRVNIFNSVIKTGDDCIALKSGCSF
VNISRVACGPGHGISVGSLGRHPNDRVEEVSVRNVVFYGTQNGARIKTFRGGCNGYIRGI
SFSNIRLVQTRNPIIIDQYYFSRWHAGNGEIKVSDITFRGFRGTSASNEAIILKCSNLWC
TNIVMDHVNISSMIPGRPTYSYCENANGRSSFTTPDVPCLKKQ
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggagcgatcctcaattacctttctgtttctggtcattgctttatcatctacttttgac
attggatatggccaaaacggcactttcgatgtgcgagattttggtgcgactgggaatgga
ctaaatgatgattctcgagcttttcttgatgcctggcaaagagcatgtggtgctgttgga
gaaatacaaaccctaaacatcccaatcggtagaaaatacatggtgaaaccagtgcaattc
gacggcccttgtaactcaaaaaatattgtaattcaggttgatggaagcattgaggcacct
tcgacgattggtgagtggacgggatgcgaattgggaagctggctgggcttccaaaatgtt
aaaggtctcaccatcaaaggagcaggagttatagatggcaagggttcaatttggtggagg
caaaagcctcaaataactaactacacgacggggactaattttgcagcacccgcggctcta
cgattccgctactgcgatgaacttgcccttagtggatttacttctctcaacagcccgaat
aagcatatcatgatacatggttccaatggtgtagatatctcaagcgttcatgtatatgca
cctgaatatagccccaacactgatggaattgttctctatgggtcgatgcgagtaaatata
ttcaactctgtcattaaaactggtgatgactgcattgcacttaagagcggctgctccttt
gtaaacataagtcgtgtagcatgtggaccaggtcatggtattagtgtgggaagtttggga
agacatcctaatgatagagttgaagaagtgagcgttaggaatgttgtcttttacggaact
cagaatggtgcaagaatcaaaacatttaggggaggatgtaatgggtatattagagggatt
tcgttcagtaatatcagacttgtacagactagaaatccaattattattgaccaatactac
ttcagtcgctggcacgctggcaacggagagattaaggtgagtgacataacattcaggggt
ttccgaggaacatcagcttccaatgaagcaataatactcaagtgctctaacctgtggtgc
accaatattgtaatggatcatgtcaacatatcttcaatgattcctggaaggccaacctat
tcttactgtgagaatgcgaatggaagatcaagctttactacacctgatgttccttgcttg
aaaaagcagtga
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