Fragaria vesca (woodland strawberry): 101297853
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Entry
101297853 CDS
T02666
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00906
Carotenoid biosynthesis
fve01100
Metabolic pathways
fve01110
Biosynthesis of secondary metabolites
Module
fve_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
101297853
Enzymes [BR:
fve01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
101297853
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Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
FAD_oxidored
HI0933_like
GDI
Thi4
Pyr_redox_2
GIDA
FAD_binding_3
GMC_oxred_N
MCRA
Motif
Other DBs
NCBI-GeneID:
101297853
NCBI-ProteinID:
XP_004303382
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Position
LG6:complement(19716179..19722268)
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AA seq
618 aa
AA seq
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MHFPNSLSFTSAPAMHLSQLPGHVHSAHLGKTRPRSQKPTNSTSGCYSIEDCLRPGRKLN
RGSGLRYSNSKDWSFVVRSSSTLSVDEVVESDGKAGGKTGYDAIVIGSGIGGLVAATQLA
VKGAKVLVLEKYVIPGGSSGYYERNGYTFDVGSSVMFGFSDKGNLNLITQALAAVGCEMQ
VIPDPTTVHYHLPDNLSVRVHREYSEFISELTAKFPHEKKGILKFFGECWKVFNALNSLE
LKSLEEPIYLFGQFFQKPLECLTLAYYLPQNAGDIARKYIQDPQLLSFIDAECFIVSTVK
ALQTPMINASMVMCDRHYGGINYPVGGVGGIAKSLAKGLVEQGSQILYKANVTGIILDQG
KAVGVRLSDKREFFAKTIISNATRWDTFGKLLKEEDLPKEEENFQKVYVKAPSFLSIHMG
VKSDVLPPDTDCHHFVLEDDWTRLEEPYGSIFLSIPTILDPSLCPEGRHILHIFTTSSIE
DWEGLSRKDYEAKKELVADEIISRLENKLFPGLKSSIVFKEVGTPKTHRRYLAREQGTYG
PLPRRTPKGLLGMPFNTTAIGGLYCVGDSCFPGQGVIAVSFSGVMCAHRVAADIGLEKKS
PVLDAALLRLLGWFRTLA
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgcactttcctaactcactaagcttcacttccgctcctgccatgcacctttctcagtta
cctggccatgttcacagtgcccacttgggtaaaaccagacccagaagtcaaaagcctaca
aattccacttcagggtgttacagtatcgaagactgcttgagacccggaaggaaattgaat
cgagggagtgggttgagatattcgaattcgaaagattggagctttgtagtgaggtccagt
tcaacgttgagtgtggatgaagtggtggagagtgatggaaaggcaggtgggaagactggc
tatgatgccattgttatagggtcagggattggagggttagttgcagccacacagttggct
gtgaagggtgccaaggttttggttttggagaagtatgtgattcctggtgggagttctggg
tactatgagagaaacggttatacttttgatgttgggtcttctgtcatgttcggtttcagc
gataagggcaatctaaacttgataacacaagcactggcagcagtgggttgtgaaatgcag
gtgatacctgatccgactactgtccattaccatctacccgacaatctttctgttcgagta
cacagagaatacagtgaatttatttcagaacttactgctaaatttccccatgaaaagaaa
gggatcctaaaattctttggtgaatgttggaaggttttcaatgccttgaactctttggaa
ctgaagtcactcgaggagcctatctacctttttggacagttctttcagaagcctcttgaa
tgcttgacactagcctattatttgcctcaaaatgccggggacatagctcgtaagtacatt
caggatccccaactgttgtctttcattgatgcggagtgttttattgtgagcacagtcaag
gctttgcagacaccaatgataaatgcgagcatggtgatgtgtgacaggcattatggtgga
attaactaccctgttggtggcgtagggggaattgcaaagtccttggccaaaggtctggtg
gagcagggcagtcagatactttacaaggccaatgttactggcatcatacttgatcaaggc
aaagctgtaggagtaaggctttcagacaagagggaattttttgccaaaaccataatatcg
aatgctacaagatgggatacctttggaaagctgttgaaggaagaagaccttccaaaggaa
gaggaaaattttcagaaagtttatgtcaaggccccatcttttctttccatacacatgggg
gtgaaatctgatgttctgccaccagacacagactgccaccattttgtgcttgaggatgat
tggacaaggttagaggagccatacggaagtatatttctaagcattccaactattcttgat
ccatcgttatgcccagaagggcgtcatattcttcacatatttacaacatcttccattgag
gactgggagggactctctcgaaaggactatgaagcaaagaaggagcttgtggcggatgaa
atcatcagcagattagaaaacaaactatttccagggctcaagtcatccatcgtttttaag
gaggtgggaacgccaaagacacacaggcggtacctggctcgtgaacagggtacttacgga
ccattaccacgcagaactcctaagggtttattaggaatgccattcaatacaacagccata
ggtggtctttactgtgttggtgatagctgctttccagggcaaggtgttatagctgtatca
ttctcaggagtaatgtgtgctcatcgagtggctgctgatataggccttgagaagaagtct
ccagtactggatgctgcccttcttagactacttgggtggtttaggacattagcatga
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