Fragaria vesca (woodland strawberry): 101297884
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Entry
101297884 CDS
T02666
Name
(RefSeq) recQ-mediated genome instability protein 1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
101297884
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fve03400
]
101297884
DNA repair and recombination proteins [BR:
fve03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
101297884
FA (Fanconi anemia) pathway
101297884
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Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Motif
Other DBs
NCBI-GeneID:
101297884
NCBI-ProteinID:
XP_004289430
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Position
LG1:complement(16258548..16261735)
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AA seq
646 aa
AA seq
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MIRRRLRLSYSSGEEEAAPPPQSSTVTHPPVTQARPNPYPSEPLPISSDDEEFIDVSDNL
SPPSPEFPESHNPRPPPPSSGGCPIGQFLQGLGLRLKREWLDGCALGLQQSVPGFRNLDA
AAKAKLCFEQFLVSDMNLSGGGVLPQNVASLHLVDLPGPYVLQVDEIVNISNPLKIRYQK
ASAGHKRCLKLSMTDGVQRAFGMEYRPIQALDALAPAGLKVVVCNVHIRHGLLMLVPQSL
EVLGGFVEELDAARKRLVDEVNQPPRGNRTRNGLVPPLANRAALAGWPPDGVHVAGQANT
STLEAPTPLQASNQGAGRNSIPINTQETVPLRAEHAVYHPSSIIDDDMSMDSIPNSRENA
VPNPSSSDLGVQRLHINIVPFTRENPVPNTAIANPPNLPFEDALDIEEDIDTDPVSISRR
THRSHPSILDDDDDDDIHLVDADETHPSSDAIMNEEDTNIVNEVEHPLLLLGEREPPFVY
LSSLFLRLGTSNIQSVRGKVKCCLTGVKSFKYEQKYDLRAYIDDGGMISEILIDHDVVQK
RIGHSPEAVKARLSSPDKAVVSKMKANMKNFQVFLSNFEGIILIEMSKGSDLPVALEMNQ
GCLSSDAWLLVRRLKGTPPAQTSESHSLRLAQTSQRLSSCPIEISP
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgataagaagacgactccggctgagctactcttccggcgaagaagaggcagcaccgcca
ccgcaatcatccaccgtgactcacccacccgttacccaagcccgtccgaacccttacccc
tccgaaccactcccgatttcctccgacgacgaggagttcatcgacgtctccgacaacctc
tcgccgccgtctcctgagtttcccgaatcccataatccacggccgcctccaccgagctcc
ggcggttgtccgattggccagtttctccagggacttggcttgaggctgaagcgggagtgg
ttggatggttgcgctttggggctacagcaatccgtgccgggttttcgaaacctcgatgcg
gcggcgaaggccaagctctgcttcgagcagtttttggtttcggatatgaatctctccgga
ggtggtgtgctccctcagaatgtggcctctcttcatcttgttgatcttcctggaccttat
gtgttgcaggttgatgaaattgtcaacattagcaatcctttgaagatcaggtatcagaaa
gcctcggctggacacaaaaggtgcctgaagctgtccatgaccgatggtgtccaacgtgct
ttcggcatggaatacaggcccattcaggcccttgatgctttggctcctgctggattgaag
gttgttgtgtgcaatgtacatatacgccatggacttcttatgctggtccctcaatctcta
gaagttctgggaggatttgttgaagagctggatgcggcacgaaaaaggcttgttgatgag
gtgaatcagccaccaaggggaaacagaaccaggaatggattagttcctcctctagcgaat
agggcagcccttgccgggtggcctcctgatggtgttcatgttgctggacaggctaatact
tccacattggaagccccaaccccccttcaggcgtctaaccaaggtgctggtagaaatagc
attccgataaatacccaagagactgttcctctacgtgcagaacatgctgtttatcatcca
tcatctattattgatgatgatatgtctatggattctattcccaatagcagagaaaatgct
gtacccaacccatcttctagtgaccttggtgttcagagactccatattaatatcgttcct
tttacgagggaaaatccagtgcctaatactgccattgctaacccacccaacctacctttt
gaggatgctttggatattgaagaggacattgacactgatcctgtatctattagccgtaga
actcataggtctcatccatcaattttggatgatgatgatgatgatgatatccatttggtt
gatgcggatgaaactcacccatcctcggatgctattatgaatgaagaggataccaatatc
gtgaatgaggtggagcacccactcctactgcttggagagcgagaacccccttttgtttac
ctatctagtttgtttctcaggttgggtaccagtaacattcaatctgtacgaggaaaggtt
aagtgttgtttgactggcgtcaagtctttcaaatatgagcagaaatatgatctccgggca
tacattgatgatggcggtatgatatcagagattctcattgatcacgatgttgtacagaaa
aggataggccattctcctgaggctgtcaaggcccgtctttcttccccagataaggctgta
gtgtctaaaatgaaggcgaatatgaagaatttccaagttttcttatcaaatttcgagggg
ataatactcattgagatgagtaaaggctctgatcttccggttgcccttgagatgaatcag
ggctgtctgtcatctgatgcatggctgcttgtgaggagactaaagggcacccctccggct
cagacatcagaaagtcactccttgcgcctggctcagacgtcacaaagactgtcctcatgc
cccattgaaatatctccctaa
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