Fragaria vesca (woodland strawberry): 101298035
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Entry
101298035 CDS
T02666
Name
(RefSeq) FACT complex subunit SSRP1-like
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
fve
Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fve03000
]
101298035
03036 Chromosome and associated proteins [BR:
fve03036
]
101298035
Transcription factors [BR:
fve03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
101298035
Chromosome and associated proteins [BR:
fve03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
101298035
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
SSrecog
POB3_N
Rttp106-like_middle
HMG_box
HMG_box_2
HMG_WDHD1
CDC45
Motif
Other DBs
NCBI-GeneID:
101298035
NCBI-ProteinID:
XP_004302353
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All DBs
Position
LG6:4325727..4331139
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AA seq
645 aa
AA seq
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MTDGHQFNSISLGGRGGTNPGQLKVYSGGILWKKQGGGKAIEVDKADIVGVTWMKIPKTN
QFGVRTRDGLYYKFIGFRDQDITSLTNYFQTTCGIVAEEKKLSVSGRNWGEVDLSDNMLS
FLVDSKQGFEVSLADVSQTQLQGKNDVTLEFHVDDTAGANEKDSLMEITFHIPNSNTQFM
GDENRPAAQVFRDKIISMADVNDFETAVVTFESIAVLTPRGRYNVELHLSFLRLQGQAND
FKIQYSSVVRLFLLPKSNQPHTFVVVTLDPPIRKGQTLYPHIVLQFETDYVVESELAIGD
DLLNGKYKDKLEPTYKGLIHDVFTKILHGLSSAKITKPGKFRSCQDGYAVKSSLKAEDGV
LYPLEKSFFFLPKPPTLITHDMIDYVEFERHGAGGSNMHYFDLLIRLKSEQEHLFRNIQR
NEYHALFDFISSKGIKIMNLGDAQVTDGVSPLLEVADDADPDPHLVRVQEEAGDEDSDEE
DEDFVLEKDDAGSPTDDSGDEGSDASESGSEKEKPPKKDPRKEPSTSKVSSSKKKLKEVD
EDGPKKKKQKKKKDPNAPKRAMSGFMFFSNMERENVKKTNPGIAFTDVGRVLGDKWKKMS
AEEKEPYEAKARQDKLRYKDEISGYNKSSTPQPMNVDSGNESDTE
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggccaccagttcaatagcatctccctcggcggccgcggcggcaccaatccg
gggcaactaaaagtatattcaggggggattttatggaagaaacaaggaggtgggaaagca
attgaggttgataaagccgacattgttggggtgacatggatgaagatcccaaagacaaat
caatttggtgttcgaactagagatgggttgtactacaagtttatcggattccgagatcag
gatatcactagtttgaccaattatttccaaactacttgtgggatagtagcagaggagaag
aagctttctgtaagtgggcgtaactggggagaagtggatttaagtgataatatgctgtct
ttcttggttgactctaaacaaggatttgaggtatctttggctgatgtctcacaaacacag
cttcaggggaaaaatgatgtcactttagagttccacgtggatgacactgctggagcaaac
gagaaagattcgttgatggaaataacttttcacattcccaactccaacactcagtttatg
ggtgatgagaatcgtcctgctgctcaggtatttcgtgacaaaatcatatcaatggcagat
gttaatgactttgaaactgctgttgtcacatttgagagtattgcagtcctcacaccaagg
ggtcgctacaatgtggaacttcatctttcattcttgcggttacaaggacaggctaatgat
ttcaaaattcagtacagcagtgttgttcgcctctttctccttcctaagtctaatcagcca
catacctttgttgttgttactcttgatccacctatccgtaaaggacaaacactgtatcca
cacattgttttgcagtttgaaaccgattatgtagttgaaagtgaactggcaataggcgac
gatcttttgaacggcaagtacaaagacaagttagaaccaacttataagggactaattcat
gatgtgttcaccaaaatactgcatggattgtcttcggccaaaattacaaaaccagggaag
ttccgcagctgtcaagatggttatgctgtgaagtcatcactgaaagctgaagacggagtt
ctatatcctctggaaaagagcttctttttcctacccaaacctcctacccttattactcat
gatatgattgactatgtggaatttgagaggcatggtgctggaggctcgaatatgcattat
tttgatcttctcatcagacttaaaagtgagcaagaacatctgtttagaaacattcagagg
aatgaatatcatgctctttttgacttcatcagttcaaagggtatcaaaatcatgaactta
ggagatgcccaagtaacagatggtgtgtctcctcttcttgaagtggcagatgatgctgat
cctgatccacatctggttcgcgtacaggaggaagctggagatgaagatagtgatgaagag
gacgaagattttgttcttgagaaggatgatgcaggttcaccaactgatgattctggggat
gaaggttctgatgctagtgaaagtggaagtgagaaagagaagcctcctaaaaaggatccc
aggaaagaaccttcaacttcaaaggtgtcatcttccaagaaaaaattgaaagaggttgat
gaagatggcccaaagaagaaaaaacagaaaaagaagaaggatccaaacgcacccaaaaga
gcgatgtctggtttcatgttcttctcgaatatggagagagagaatgtgaagaagaccaac
cccggcattgcattcacggatgtaggaagagtgctcggagacaagtggaagaagatgtca
gcggaggagaaagaaccatatgaagcaaaggcccgtcaagataagttacgctacaaggat
gaaattagtggctacaacaagagcagcaccccccaacccatgaatgtggattcagggaat
gaatctgacaccgagtag
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