Fragaria vesca (woodland strawberry): 101298079
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Entry
101298079 CDS
T02666
Name
(RefSeq) tryptophan synthase alpha chain
KO
K01695
tryptophan synthase alpha chain [EC:
4.2.1.20
]
Organism
fve
Fragaria vesca (woodland strawberry)
Pathway
fve00260
Glycine, serine and threonine metabolism
fve00400
Phenylalanine, tyrosine and tryptophan biosynthesis
fve01100
Metabolic pathways
fve01110
Biosynthesis of secondary metabolites
fve01230
Biosynthesis of amino acids
Module
fve_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
fve00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
101298079
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
101298079
Enzymes [BR:
fve01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
101298079
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Gene cluster
GFIT
Motif
Pfam:
Trp_syntA
His_biosynth
PcrB
ThiG
NanE
TMP-TENI
FMN_dh
BtpA
Ribul_P_3_epim
Motif
Other DBs
NCBI-GeneID:
101298079
NCBI-ProteinID:
XP_004289899
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Position
LG2:complement(5518194..5521774)
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AA seq
313 aa
AA seq
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MASSLKSATGFLHLKNPQTPLLFRSPAQKSSLSFKKLTPMASLTTANTTVGLAKTFIKLK
EQGKVALIPYITAGDPDLSVTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRAL
ARGTNLNAILAMLKEVIPKLSCPIALFTYYNPIMKRGVGEFMSTIQDVGVHGLVVPDVPL
EETVILRKEALKNNIELVLLTTPTTPMERMKAIAEASEGFLYLVSSIGVTGARASVNERV
PALLREIKEATSKPVAVGFGISKPEQAKQVAGWGADGVIVGSAIVKILGDANTPEEGLKE
LEIFTKSLKSALL
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttctcttaaatcggcgactggttttcttcacctgaagaaccctcaaacccca
ttgcttttccggtccccggctcaaaaatcctccctttcgttcaagaaattgactccaatg
gcttctctgaccaccgccaacaccaccgttggcctggccaaaacattcatcaaactcaag
gagcaaggcaaggttgcattaatcccttacattactgctggtgatcctgatctatcagtc
actgcagaggcattgaaggtgctggattcatgtggatcggacataattgaactaggcgtg
ccgtactcggatccgttagcagatgggcctgttattcaggccgcggccactcgtgccttg
gcaagagggactaatttgaatgcaatcttggcaatgttgaaggaggtgattcctaaactg
tcttgcccgattgctctttttacatactacaatcctattatgaagcgtggtgttggagag
tttatgtccaccattcaagacgtaggtgtacatggacttgtggttccagatgtcccgttg
gaagagacggtcattttgagaaaggaagccttgaaaaataatattgaattggttttacta
actactcccaccactccaatggagcgaatgaaggctattgcagaagcctccgaaggcttt
ttgtacctggtgagctcaattggagttacgggggcacgggcatctgtgaatgaacgagtt
cctgctcttttaagggaaattaaagaggctacatcaaagccggtagcagttggttttggc
atttctaagcctgaacaagcgaaacaggtagcggggtggggagctgatggtgtaattgtt
ggtagtgcaatcgtaaagatcttgggtgatgccaacactcccgaggaaggactgaaggaa
ctagaaatcttcaccaagtcgttgaaatctgcactcctttaa
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