KEGG   Fragaria vesca (woodland strawberry): 101298235
Entry
101298235         CDS       T02666                                 
Name
(RefSeq) coatomer subunit beta'-2
  KO
K17302  coatomer subunit beta'
Organism
fve  Fragaria vesca (woodland strawberry)
Brite
KEGG Orthology (KO) [BR:fve00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:fve04131]
    101298235
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:fve04147]
    101298235
Membrane trafficking [BR:fve04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    101298235
Exosome [BR:fve04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   101298235
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 WD40_CDC20-Fz Beta-prop_WDR75_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML EIF3I Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_WDR19_1st NBCH_WD40 PEP5_VPS11_N Beta-prop_HPS5 WDR90_beta-prop_4th Beta-prop_WDR75_2nd Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_Nup120_160 Beta-prop_SPT8 TPR_CcmH_CycH WD_LRWD1 TPR_8 TPR_12 TPR_2 TPR_1 TPR_GEMI5 Beta-prop_WDR35_TULP_N
Other DBs
NCBI-GeneID: 101298235
NCBI-ProteinID: XP_004302920
LinkDB
Position
LG6:11413230..11423544
AA seq 921 aa
MPLRLEIKRKLAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTMAKSFEVTELPV
RSAKFISRKQWVVAGADDMFIRVYNYNTMDKIKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWDKGWICTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT
LDAHQKGVNCVDYFTGGDKPYLITGSDDHTAKVWDYQTKGCVQTLEGHTHNVSAVCFHPE
LPIIITGSEDGTVRIWHSTTYRLENTLNYGLERVWAIGYMKGSRRVVIGYDEGTIMVKLG
REVPVASMDNSGKIIWAKHNEIQTVNIKSVGADYEVTDGERLPLAVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFAWSSDGEYAVRESTSKIKIFTKNFQ
EKRSIRPTFSAEHIYGGTLLAMCSNDFICFYDWAECRLIRRIDVNVKNLYWADSGDLVAI
ASDASFYILKYNRDVVSSYLDSGRPVDEQGVEDAFELLHEMNERVRTGIWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVFLIDKEFNVMGYTLLLSLIEYKTLMM
RGDLERANAVLPSIPKDHHNSVARFLESRGMIEDALEVATDPDYRFELAIQLGRLEIAKE
IASEVQSESKWKQLGELAMSTGNLEMAEQCLKHAMDLSGLLLLYSSLGDAEGISTLASLA
KEQGKNNVAFLCLFILGRLEECLDLLVESNRIPEAALMARSYLPSKVSEIVAIWRKDLSK
VNSKAAESLADPEQYSNLFEDWQVALSVESRAAETRGVYPPAEEYVKHVDKTHMTLVEAF
KNLQVDEENLQMDEEEPRENGDSNHEVSELNGEQTVENHADEHHEEGSQEEAVVVDADST
DGAVLVNGSEAEEDWVLTPRH
NT seq 2766 nt   +upstreamnt  +downstreamnt
atgcctctccgactggaaatcaagaggaaacttgctcaaagatcagagagagtaaaatct
gtggatctacatccaacagaaccatggatattggcgagtctatattctggaacagtgtgt
atttggaactaccaaactcagaccatggctaagtcatttgaggtcactgagttaccagtt
aggtcagccaaatttatatcacgcaagcaatgggttgttgctggagctgacgatatgttc
attcgtgtatacaactacaacaccatggataagattaaagtatttgaggcccatactgac
tacattagatgtgtggctgttcatcctacactcccatatgtgttatcatcatctgatgat
atgctcatcaagctatgggattgggacaagggttggatctgtactcagatatttgaagga
cattcacattatgtgatgcaagtgacatttaatccaaaagacaccaacacctttgcaagt
gcgtctcttgatcgcaccataaagatatggaatctaggctctcctgatccaaattttaca
ctggatgcccaccagaaaggtgtaaattgcgttgattactttacgggtggtgacaaacct
tatctaattactggttccgatgatcacactgctaaggtgtgggactaccaaacaaaaggt
tgtgtccagacacttgaaggccatacacacaatgtttctgctgtatgttttcatcccgaa
ctccctataataataactggatcagaggatggaacagtacgaatatggcattcaaccact
tacaggcttgaaaacacgttgaattacgggcttgaaagagtttgggctattggatacatg
aagggctcacgacgggttgtgattggttatgatgaaggaaccattatggtaaaacttgga
cgtgaagtgcctgttgctagtatggacaatagtggaaagatcatttgggctaagcacaat
gaaattcagacagtgaacattaagagtgtgggtgctgattatgaggttactgatggagag
agattgcctttggccgtcaaggagttgggcacatgcgatctttacccccaaagcttaaag
cacaaccccaatgggaggtttgttgtagtttgtggagatggagagtacattatatatact
gctttggcatggagaaatcggtcatttggttctgctttggaatttgcttggtcatctgat
ggagagtatgctgttcgagagagtacttcaaaaattaaaattttcactaaaaacttccag
gagaaaaggagtattcgaccgacattttcagctgaacatatatatggtggaaccttattg
gcaatgtgctcaaatgattttatttgcttttatgattgggctgagtgcagattgattcgt
agaattgatgtgaatgtgaagaatctctattgggctgatagtggcgatttagttgctatt
gccagtgacgcctcattctacatcctgaagtacaaccgggatgtggtctcctcttatttg
gatagcggaagacctgtagatgaacaaggtgtagaagatgcatttgagcttctccatgaa
atgaatgaacgagtcaggactggtatatgggttggcgattgcttcatttacaacaactca
tcctggaggcttaattattgtgttggtggggaggtaactacaatgttccatttagaccgg
ccaatgtacctgttaggttatcttgccaatcaaagtcgggtgtttctgatagacaaagag
ttcaatgtgatggggtacacactacttttgagtctgatcgaatacaagacacttatgatg
cgtggagacctggaaagggccaatgcagttttaccttcaattcctaaagaccatcataac
agtgtggctcgtttcttggaatcacgaggtatgatagaggatgcacttgaagttgccaca
gatcctgattacagatttgagctagccattcagcttggtagattggaaattgcaaaggaa
attgccagtgaggtgcagagtgaatctaaatggaaacagctaggtgaactagccatgtct
actggaaatttggaaatggctgagcaatgtttgaagcatgccatggacttgagtggttta
ttattgctttattcatctcttggagatgctgagggaatctcaacacttgcatcccttgct
aaagaacaagggaagaacaatgttgcattcctttgtttgttcatactgggtcgcttggaa
gagtgccttgacctgctagttgaaagcaatcggatacctgaggctgctttgatggctcga
tcgtatcttccaagcaaggtttcagaaatagtagctatttggagaaaagaccttagcaag
gttaattcaaaagctgccgaatctttggctgatcctgaacagtattctaatttgtttgaa
gattggcaagttgctctgtcggttgaatctagagccgcggagacaaggggtgtttatcct
cctgcagaggagtatgtgaaacatgttgataaaacacacatgacccttgtggaggctttc
aagaacttgcaagtggatgaagaaaacttgcaaatggatgaagaggagccccgtgaaaat
ggagactcaaaccatgaggtttctgaattgaatggggaacagactgtagagaatcatgca
gatgaacatcatgaggaagggagccaggaggaggctgttgtcgtggatgctgattctacg
gatggcgctgtactcgttaatggtagcgaagctgaagaagactgggtgcttacaccacgt
cactag

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